RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 SUDS3Q9H7L9 328 aaPredicted RBP13□□□□□ -0.33
ATPAF2-207ENST00000488753 VPS18Q9P253 973 aa13□□□□□ -0.33
ATPAF2-207ENST00000488753 CD84Q9UIB8 345 aa13□□□□□ -0.33
ATPAF2-207ENST00000488753 A0A0U1RQS6 177 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 LRRD1A4D1F6 860 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 ANKRD66B4E2M5 251 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 C1QL1O75973 258 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 CD82P27701 267 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 ACTR1BP42025 376 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 POLD2P49005 469 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 ACTR1AP61163 376 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 BIRC2Q13490 618 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 MESDQ14696 234 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 SLC9A4Q6AI14 798 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 DOK6Q6PKX4 331 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 CCDC81Q6ZN84 652 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 JAMLQ86YT9 394 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 GALNT13Q8IUC8 556 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 NAGSQ8N159 534 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 PLD5Q8N7P1 536 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 LPCAT1Q8NF37 534 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 SLC35G2Q8TBE7 412 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 CCHCR1Q8TD31 782 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 CCDC42Q96M95 316 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 SMIM14Q96QK8 99 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 RIOK2Q9BVS4 552 aaKnown RBP12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 BRD8Q9H0E9 1235 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 ABHD10Q9NUJ1 306 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 PISDQ9UG56 409 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 ST14Q9Y5Y6 855 aa12.99□□□□□ -0.33
ATPAF2-207ENST00000488753 C1orf232A0A0U1RR37 186 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 C3orf70A6NLC5 250 aaPredicted RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 KCNK1O00180 336 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 PPP1R12AO14974 1030 aaPredicted RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 MFAP3LO75121 409 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 CLDN7O95471 211 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 JCHAINP01591 159 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 PRB1P04280 392 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 MMP2P08253 660 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 LIPCP11150 499 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 HGFP14210 728 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 ALDH4A1P30038 563 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 SLC1A1P43005 524 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 FASLGP48023 281 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 SPINT3P49223 89 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 OR1D5P58170 312 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 PDK1Q15118 436 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 TCEAL1Q15170 157 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 QPCTQ16769 361 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 HENMT1Q5T8I9 393 aaKnown RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 TMPRSS9Q7Z410 1059 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 TTC9Q92623 222 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 MLPHQ9BV36 600 aaPredicted RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 SEMA6CQ9H3T2 930 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 FAM83DQ9H4H8 585 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 RMI1Q9H9A7 625 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 NHEJ1Q9H9Q4 299 aaPredicted RBP12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 PKD2L2Q9NZM6 624 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 TMEM98Q9Y2Y6 226 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
ATPAF2-207ENST00000488753 ATMQ13315 3056 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 APOL1O14791 398 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 PPM1DO15297 605 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 ITIH1P19827 911 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 CD1CP29017 333 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 CD86P42081 329 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 GPLD1P80108 840 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 CFHR1Q03591 330 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 SLC14A2Q15849 920 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 AMZ1Q400G9 498 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 TMEM164Q5U3C3 297 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 TRIM74Q86UV6 250 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 ZNF843Q8N446 348 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 SFRP1Q8N474 314 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 OR4D9Q8NGE8 314 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 WDR24Q96S15 920 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 AGAP2Q99490 1192 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 CHP1Q99653 195 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 RDH14Q9HBH5 336 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 NFKBIL1Q9UBC1 381 aaPredicted RBP12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 CNOT6Q9ULM6 557 aaKnown RBP12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
ATPAF2-207ENST00000488753 IGHV1OR21-1A0A087WYE8 117 aa12.96□□□□□ -0.33
ATPAF2-207ENST00000488753 PRAMEF33A0A0G2JMD5 474 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms