RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 LRRC66Q68CR7 880 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 APOBEC4Q8WW27 367 aaKnown RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 PIH1D2Q8WWB5 315 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 SH3KBP1Q96B97 665 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 ABCG8Q9H221 673 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 FBXO8Q9NRD0 319 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 PLEKHM1Q9Y4G2 1056 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 SCINQ9Y6U3 715 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 NKX2-8O15522 239 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 CTPS1P17812 591 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 CDK11BP21127 795 aaKnown RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 SERPINB6P35237 376 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 NOP2P46087 812 aaKnown RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 MAXP61244 160 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 HHEXQ03014 270 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 ABHD18Q0P651 414 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 CRTC2Q53ET0 693 aaPredicted RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 BOLA3Q53S33 107 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 MARK2Q7KZI7 788 aaKnown RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 ARHGAP22Q7Z5H3 698 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 RAVER1Q8IY67 606 aaKnown RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 EXD1Q8NHP7 514 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 TRIM7Q9C029 511 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 SARS2Q9NP81 518 aaKnown RBP18.93■□□□□ 0.62
GGPS1-206ENST00000488594 CD84Q9UIB8 345 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 DNPEPQ9ULA0 475 aa18.93■□□□□ 0.62
GGPS1-206ENST00000488594 MAP3K6O95382 1288 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 FTLP02792 175 aaPredicted RBP18.92■□□□□ 0.62
GGPS1-206ENST00000488594 GZMAP12544 262 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 AMPD1P23109 780 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 EPHA4P54764 986 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 SEPT6Q14141 434 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 PTPRRQ15256 657 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 POLNQ7Z5Q5 900 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 ZNF761Q86XN6 746 aaPredicted RBP18.92■□□□□ 0.62
GGPS1-206ENST00000488594 LRRC49Q8IUZ0 686 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 SCAMP4Q969E2 229 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 COX14Q96I36 57 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 CSPG4P5Q96PW8 444 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 EPB41L1Q9H4G0 881 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 MRPL47Q9HD33 250 aaKnown RBP18.92■□□□□ 0.62
GGPS1-206ENST00000488594 VPS18Q9P253 973 aa18.92■□□□□ 0.62
GGPS1-206ENST00000488594 CNOT8Q9UFF9 292 aaKnown RBP18.92■□□□□ 0.62
GGPS1-206ENST00000488594 TMEM184BQ9Y519 407 aaPredicted RBP18.92■□□□□ 0.62
GGPS1-206ENST00000488594 DOPEY2Q9Y3R5 2298 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 A8MU76 341 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 FZD6O60353 706 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 STK17BO94768 372 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 PRKAR1AP10644 381 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 SLC2A4P14672 509 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 PTSQ03393 145 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 SNAP47Q5SQN1 464 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 RBM43Q6ZSC3 357 aaKnown RBP18.91■□□□□ 0.62
GGPS1-206ENST00000488594 RFLNAQ6ZTI6 216 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 KDELC2Q7Z4H8 507 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 TRIM74Q86UV6 250 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 AVL9Q8NBF6 648 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 TRIM11Q96F44 468 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 CTRCQ99895 268 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 HERPUD2Q9BSE4 406 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.91■□□□□ 0.62
GGPS1-206ENST00000488594 ZNF71Q9NQZ8 489 aaPredicted RBP18.91■□□□□ 0.62
GGPS1-206ENST00000488594 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.91■□□□□ 0.62
GGPS1-206ENST00000488594 ETNK2Q9NVF9 386 aa18.91■□□□□ 0.62
GGPS1-206ENST00000488594 COL12A1Q99715 3063 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 TRBV23OR9-2A0A075B6M9 112 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 A0A0J9YYE9 177 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 LOC101059948A0A1B0GTJ6 334 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 CLEC18AA5D8T8 446 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 ASMTLO95671 621 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 TRBC1P01850 177 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 PDHA1P08559 390 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 MYBL1P10243 752 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 GP1BBP13224 206 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 STC1P52823 247 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 EPHB1P54762 984 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 MAP7Q14244 749 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 NCAPHQ15003 741 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 IGFBP7Q16270 282 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 SMTNL2Q2TAL5 461 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 IYDQ6PHW0 289 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 CLEC18BQ6UXF7 455 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 APTXQ7Z2E3 356 aaKnown RBP18.9■□□□□ 0.62
GGPS1-206ENST00000488594 SLC9B2Q86UD5 537 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 TEX26Q8N6G2 289 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 CLEC18CQ8NCF0 446 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 STARD8Q92502 1023 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 NCSTNQ92542 709 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 ZNF653Q96CK0 615 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 POLR1EQ9GZS1 481 aaKnown RBP18.9■□□□□ 0.62
GGPS1-206ENST00000488594 RMI1Q9H9A7 625 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 ANO10Q9NW15 660 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 ZNHIT2Q9UHR6 403 aa18.9■□□□□ 0.62
GGPS1-206ENST00000488594 POLR1CO15160 346 aaPredicted RBP18.89■□□□□ 0.61
GGPS1-206ENST00000488594 INPP4BO15327 924 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 EML2O95834 649 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 CES1P23141 567 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 IL1R2P27930 398 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 OAS2P29728 719 aaKnown RBP18.89■□□□□ 0.61
GGPS1-206ENST00000488594 NFATC2Q13469 925 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms