RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 PPIDQ08752 370 aaKnown RBP22.48■■□□□ 1.19
PTPN4-211ENST00000488279 MAP9Q49MG5 647 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 TAF1BQ53T94 588 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-211ENST00000488279 PHF19Q5T6S3 580 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-211ENST00000488279 OR2M4Q96R27 311 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 LYSMD1Q96S90 227 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 AGAP2Q99490 1192 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 RDH14Q9HBH5 336 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 ABHD10Q9NUJ1 306 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 HEY1Q9Y5J3 304 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 KIF26BQ2KJY2 2108 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 C1orf232A0A0U1RR37 186 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 ZNF487B1APH4 448 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 KCNK1O00180 336 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 NVLO15381 856 aaKnown RBP22.47■■□□□ 1.19
PTPN4-211ENST00000488279 CD86P42081 329 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 NR1D2Q14995 579 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 CLPPQ16740 277 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-211ENST00000488279 PYCR3Q53H96 274 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 CCDC81Q6ZN84 652 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 USP53Q70EK8 1073 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 MARK2Q7KZI7 788 aaKnown RBP22.47■■□□□ 1.19
PTPN4-211ENST00000488279 TMPRSS9Q7Z410 1059 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 TRIM74Q86UV6 250 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 GALNT13Q8IUC8 556 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 SLITRK4Q8IW52 837 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 NAGSQ8N159 534 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 WBP1Q96G27 269 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 COX14Q96I36 57 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 CHP1Q99653 195 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 MLPHQ9BV36 600 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-211ENST00000488279 ADGRE3Q9BY15 652 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 SEMA6CQ9H3T2 930 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 NHEJ1Q9H9Q4 299 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-211ENST00000488279 WDR70Q9NW82 654 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 AKAP7Q9P0M2 348 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-211ENST00000488279 ACSL6Q9UKU0 697 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 PLEKHM1Q9Y4G2 1056 aa22.47■■□□□ 1.19
PTPN4-211ENST00000488279 ANKRD66B4E2M5 251 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 K7ENP7 123 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 AGRPO00253 132 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 INPP4BO15327 924 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 ASMTLO95671 621 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 MMP2P08253 660 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 ODF2Q5BJF6 829 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 INO80CQ6PI98 192 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-211ENST00000488279 VSIG1Q86XK7 387 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 VSTM4Q8IW00 320 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 RHOT2Q8IXI1 618 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 PLD5Q8N7P1 536 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 CCHCR1Q8TD31 782 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 PATE1Q8WXA2 126 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 CCNL2Q96S94 520 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-211ENST00000488279 SPTLC3Q9NUV7 552 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 ZNHIT2Q9UHR6 403 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 UNC13CQ8NB66 2214 aa22.46■■□□□ 1.19
PTPN4-211ENST00000488279 RGSL1A5PLK6 1076 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 APOL1O14791 398 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 ZFXP17010 805 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-211ENST00000488279 ITIH1P19827 911 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 CD1CP29017 333 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 SPINT3P49223 89 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 IFI35P80217 286 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-211ENST00000488279 AP1B1Q10567 949 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 LRP8Q14114 963 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 PDK1Q15118 436 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 QPCTQ16769 361 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 SLC9A4Q6AI14 798 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 PCSK4Q6UW60 755 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 CNTD1Q8N815 330 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 ANP32EQ9BTT0 268 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 FAM83DQ9H4H8 585 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 PKD2L2Q9NZM6 624 aa22.45■■□□□ 1.18
PTPN4-211ENST00000488279 C3orf70A6NLC5 250 aaPredicted RBP22.44■■□□□ 1.18
PTPN4-211ENST00000488279 PPM1DO15297 605 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 C1QL1O75973 258 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 MTA2O94776 668 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 ZBTB17Q13105 803 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 LRRC38Q5VT99 294 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 NUDT22Q9BRQ3 303 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 TSPY26PQ9H489 355 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 VPS18Q9P253 973 aa22.44■■□□□ 1.18
PTPN4-211ENST00000488279 CNOT6Q9ULM6 557 aaKnown RBP22.44■■□□□ 1.18
PTPN4-211ENST00000488279 MFAP3LO75121 409 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 ATP1A1P05023 1023 aaKnown RBP22.43■■□□□ 1.18
PTPN4-211ENST00000488279 SLC1A1P43005 524 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 MAPK10P53779 464 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 CFHR1Q03591 330 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 TMEM164Q5U3C3 297 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 ZNF574Q6ZN55 896 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-211ENST00000488279 USP7Q93009 1102 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 WDR24Q96S15 920 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 SEPT10Q9P0V9 454 aa22.43■■□□□ 1.18
PTPN4-211ENST00000488279 ARHGEF17Q96PE2 2063 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-211ENST00000488279 PRAMEF33A0A0G2JMD5 474 aa22.42■■□□□ 1.18
PTPN4-211ENST00000488279 PPP1R12AO14974 1030 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-211ENST00000488279 PRAMEF10O60809 474 aa22.42■■□□□ 1.18
PTPN4-211ENST00000488279 LIPCP11150 499 aa22.42■■□□□ 1.18
PTPN4-211ENST00000488279 ETV5P41161 510 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms