RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 WDR73Q6P4I2 378 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 KLHL35Q6PF15 583 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 KCTD18Q6PI47 426 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF517Q6ZMY9 492 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 ZSCAN30Q86W11 494 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 PGBD5Q8N414 524 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 SGCDQ92629 289 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 RND1Q92730 232 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 SECISBP2LQ93073 1101 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF622Q969S3 477 aaKnown RBP eCLIP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC34Q96HJ3 373 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 MARK4Q96L34 752 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 CMTM3Q96MX0 182 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF830Q96NB3 372 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 SERINC2Q96SA4 455 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 FIZ1Q96SL8 496 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 CSF3RQ99062 836 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 NUDT16L1Q9BRJ7 211 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 CENPOQ9BU64 300 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 MTMR6Q9Y217 621 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 R3HDM2Q9Y2K5 976 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 NFS1Q9Y697 457 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 NCOA1Q15788 1441 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 TRIP12Q14669 1992 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 RUSC2Q8N2Y8 1516 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 C1orf226A1L170 272 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 CPED1A4D0V7 1026 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 PLRG1O43660 514 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GAGE7O76087 117 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GFPT2O94808 682 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 EGFP01133 1207 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GAGE12FP0CL80 117 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GAGE12GP0CL81 117 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GAGE12IP0CL82 117 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 TNFRSF8P28908 595 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 BDKRB2P30411 391 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 MAPK4P31152 587 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 PSMB10P40306 273 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 CLCN3P51790 818 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GALCP54803 685 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 RRP1P56182 461 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 DSCR9P59020 149 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 TUBA1BP68363 451 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC173Q0VFZ6 552 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GAGE1Q13065 139 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GAGE4Q13068 117 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 AIMP2Q13155 320 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 CUL4AQ13619 759 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 BECN1Q14457 450 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 SLC39A14Q15043 492 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 ATP13A5Q4VNC0 1218 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF585BQ52M93 769 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 PAPPA-AS1Q5QFB9 102 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 FAM69BQ5VUD6 431 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 RHBDF2Q6PJF5 856 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 DPPA4Q7L190 304 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 CACNA2D4Q7Z3S7 1137 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 TICAM1Q8IUC6 712 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 CREBRFQ8IUR6 639 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 ADHFE1Q8IWW8 467 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 TEX11Q8IYF3 940 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 WDTC1Q8N5D0 677 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 NUDCD2Q8WVJ2 157 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 IGSF8Q969P0 613 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 NSUN4Q96CB9 384 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 ERP27Q96DN0 273 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 RTP4Q96DX8 246 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 C1orf74Q96LT6 269 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 C3orf30Q96M34 536 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 ACOX2Q99424 681 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 KCNN2Q9H2S1 579 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 GHITMQ9H3K2 345 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 TINAGQ9UJW2 476 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 KTN1Q86UP2 1357 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 AKNAQ7Z591 1439 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 KIAA1107Q9UPP5 1409 aa3.87□□□□□ -1.79
ECHDC1-217ENST00000488087 KDM5BQ9UGL1 1544 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 IGLV5-37A0A075B6J1 123 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 PTGES3LE9PB15 166 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 H3BQ06 376 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SCAMP1O15126 338 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SLC28A2O43868 658 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 JRKO75564 520 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 PTMAP06454 111 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF12P17014 697 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 TKTP29401 623 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 TM4SF1P30408 202 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 HOXD13P35453 343 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 PRCPP42785 496 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 PDLIM4P50479 330 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 SEC61A1P61619 476 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CSNK2A1P68400 391 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 FOXM1Q08050 763 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CHAF1BQ13112 559 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 WTAPQ15007 396 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 TOMM20Q15388 145 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 CDONQ4KMG0 1287 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 RILPL1Q5EBL4 403 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 C1QTNF12Q5T7M4 302 aa3.86□□□□□ -1.79
ECHDC1-217ENST00000488087 NADSYN1Q6IA69 706 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms