RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CYP11A1P05108 521 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 CACNG1Q06432 222 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 VAC14Q08AM6 782 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 MPPE1Q53F39 396 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 ADGRF1Q5T601 910 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 EPGNQ6UW88 154 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 MRPL10Q7Z7H8 261 aaKnown RBP11.77□□□□□ -0.52
TRA2B-214ENST00000487615 TREML1Q86YW5 311 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 SYTL1Q8IYJ3 562 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 CDKN2AIPNLQ96HQ2 116 aa11.77□□□□□ -0.52
TRA2B-214ENST00000487615 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.77□□□□□ -0.52
TRA2B-214ENST00000487615 DHRS12A0PJE2 317 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 KCNH1O95259 989 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 CATP04040 527 aaKnown RBP11.77□□□□□ -0.53
TRA2B-214ENST00000487615 SOAT1P35610 550 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 SLC11A1P49279 550 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 PRIM2P49643 509 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 RAP1GDS1P52306 607 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 RAD23AP54725 363 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 IRF8Q02556 426 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 FOLH1Q04609 750 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 LRRC74AQ0VAA2 488 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 RALGDSQ12967 914 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 BLMHQ13867 455 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 STARD3Q14849 445 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 MAPKAPK3Q16644 382 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ALFQ53S48 1182 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 SPATA19Q7Z5L4 167 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 UMODL1-AS1Q8N2C9 162 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 FIBCD1Q8N539 461 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 DHRSXQ8N5I4 330 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ADCY4Q8NFM4 1077 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 BBS2Q9BXC9 721 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ZFP14Q9HCL3 533 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 DOCK1Q14185 1865 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ILVBLA1L0T0 632 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 MAFKO60675 156 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 PAPSS2O95340 614 aaPredicted RBP11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ESR1P03372 595 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 PCNAP12004 261 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 IMPDH1P20839 514 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 FBXO48Q5FWF7 155 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ISLR2Q6UXK2 745 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 AMIGO2Q86SJ2 522 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 TBC1D19Q8N5T2 526 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 C2CD4AQ8NCU7 369 aaPredicted RBP11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 GKN1Q9NS71 199 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 ZDHHC2Q9UIJ5 367 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 SNX6Q9UNH7 406 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 CPQQ9Y646 472 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 AP4B1Q9Y6B7 739 aa11.77□□□□□ -0.53
TRA2B-214ENST00000487615 CAPN8A6NHC0 703 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 KPNA5O15131 536 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 PRAMEF1O95521 474 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 IL1BP01584 269 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 PFKPQ01813 784 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CAMK2GQ13555 558 aaPredicted RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ACOX1Q15067 660 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 FRMD7Q6ZUT3 714 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 BEND5Q7L4P6 421 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 STK32CQ86UX6 486 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 PHTF2Q8N3S3 785 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TMEM132CQ8N3T6 1108 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ARL14EPQ8N8R7 260 aaPredicted RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ZMIZ2Q8NF64 920 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 IL12RB2Q99665 862 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TMLHEQ9NVH6 421 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 AP3M1Q9Y2T2 418 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 GLYATL1P3A0A0U1RQE8 302 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 MATN2O00339 956 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 HAPLN1P10915 354 aaPredicted RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 PTGER3P43115 390 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ACSM2AQ08AH3 577 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ACSM2BQ68CK6 577 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 C3orf58Q8NDZ4 430 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ELMO1Q92556 727 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TMEM175Q9BSA9 504 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TFB2MQ9H5Q4 396 aaKnown RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF556Q9HAH1 456 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 INVSQ9Y283 1065 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TTC36A6NLP5 189 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 SLC9A3R1O14745 358 aaPredicted RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 SLC25A14O95258 325 aaPredicted RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CCT8P50990 548 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 SERINC3Q13530 473 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CGB2Q6NT52 195 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 DET1Q7L5Y6 550 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CPNE9Q8IYJ1 553 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 TMEM199Q8N511 208 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 CPSF7Q8N684 471 aaKnown RBP11.76□□□□□ -0.53
TRA2B-214ENST00000487615 RNF217Q8TC41 542 aa11.76□□□□□ -0.53
TRA2B-214ENST00000487615 LZICQ8WZA0 190 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms