RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 LINC00346Q8IVM7 164 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SPATA6LQ8N4H0 392 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 TRIB2Q92519 343 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SLC22A18Q96BI1 424 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 NLRP4Q96MN2 994 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 ACOX2Q99424 681 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 TEX12Q9BXU0 123 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 KCNN2Q9H2S1 579 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 FOXP1Q9H334 677 aaPredicted RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 ESRP2Q9H6T0 727 aaKnown RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 MRPL15Q9P015 296 aaKnown RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 PTRH2Q9Y3E5 179 aaKnown RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 IQGAP1P46940 1657 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 ADGBQ8N7X0 1667 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 PLXNC1O60486 1568 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SAMD9LQ8IVG5 1584 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 INO80Q9ULG1 1556 aaPredicted RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SHANK2Q9UPX8 1470 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 OR2A25A4D2G3 310 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 SH2B2O14492 632 aaPredicted RBP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 ITM2AO43736 263 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 TOM1O60784 492 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PPFIA2O75334 1257 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 G6PDP11413 515 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 IL11P20809 199 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 GPTP24298 496 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 TBXAS1P24557 533 aaPredicted RBP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PON1P27169 355 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 EIF2S3P41091 472 aaKnown RBP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 ENTPD1P49961 510 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 METAP2P50579 478 aaKnown RBP eCLIP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 HSD17B4P51659 736 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PPATQ06203 517 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 CTTNQ14247 550 aaKnown RBP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 HNF4GQ14541 408 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PCLAFQ15004 111 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 ETFDHQ16134 617 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PCGF3Q3KNV8 242 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 BMP2KLQ5H9B9 411 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM198Q66K66 360 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 GPR139Q6DWJ6 353 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 B3GNT6Q6ZMB0 384 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 DPPA4Q7L190 304 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 SHFQ7M4L6 423 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 IL17RCQ8NAC3 791 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 GAD1Q99259 594 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PCGF1Q9BSM1 259 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 PLAC1Q9HBJ0 212 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 CWC15Q9P013 229 aaKnown RBP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 SEC63Q9UGP8 760 aaKnown RBP5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 CMAHPQ9Y471 501 aa5.03□□□□□ -1.6
PRPF38A-203ENST00000487160 A2ML1A8K2U0 1454 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 DEPDC5O75140 1603 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 LY6G6EA0A0G2JKS1 128 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 RPS10-NUDT3A0A1W2PQS6 291 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 TIMM23O14925 209 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ATP2A1O14983 1001 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ADAM20O43506 726 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ZNF500O60304 480 aaPredicted RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 VNN2O95498 520 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 LCATP04180 440 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 NAGAP17050 411 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 CD58P19256 250 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ANXA7P20073 488 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 RRP1P56182 461 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 C21orf58P58505 322 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 TAS2R40P59535 323 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 MRPS5P82675 430 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ZBED6P86452 979 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 NTRK2Q16620 822 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 EIF2S3LQ2VIR3 472 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 OTUD1Q5VV17 481 aaPredicted RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 SIGIRRQ6IA17 410 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 METTL2BQ6P1Q9 378 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 COLCA1Q6ZS62 124 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 PRPF39Q86UA1 669 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 KBTBD6Q86V97 674 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 NRACQ8N912 160 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 OR8K5Q8NH50 307 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 METTL2AQ96IZ6 378 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 TMEM79Q9BSE2 394 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 TXLNGYQ9BZA5 131 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 PPP1R3EQ9H7J1 279 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 GIMAP4Q9NUV9 329 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 POT1Q9NUX5 634 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 MTMR10Q9NXD2 777 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 MAGED1Q9Y5V3 778 aaPredicted RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 PTPRKQ15262 1439 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ATP7AQ04656 1500 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 SYCP2Q9BX26 1530 aa5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 ZC3H13Q5T200 1668 aaKnown RBP5.02□□□□□ -1.61
PRPF38A-203ENST00000487160 TROQ12816 1431 aaPredicted RBP5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 A0A1B0GVM2 712 aa5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 VWA5AO00534 786 aa5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 PPEF2O14830 753 aa5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 PAPSS1O43252 624 aaPredicted RBP5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 HSPA12AO43301 675 aa5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 RGS14O43566 566 aa5.01□□□□□ -1.61
PRPF38A-203ENST00000487160 SOX30O94993 753 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms