RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MYH14Q7Z406 1995 aaKnown RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 RREB1Q92766 1687 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 TRBV5-7A0A0A0MS05 114 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 FAM237AA0A1B0GTK4 181 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 FAM90A8PA6NJQ4 464 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 C2CD4BA6NLJ0 364 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 HSPB2A8KAH6 182 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 FOXO6A8MYZ6 492 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 MASP2O00187 686 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 TAF4O00268 1085 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 TP73O15350 636 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 KIF1CO43896 1103 aaKnown RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 HS6ST1O60243 411 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CAMTA2O94983 1202 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 WNT1P04628 370 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 PCCAP05165 728 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 LCKP06239 509 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 FAM90A13PP0C7W8 464 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 FAM90A24PP0C7X0 464 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CTPS1P17812 591 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 RYKP34925 604 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 RFC1P35251 1148 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 COPB2P35606 906 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 SLC16A2P36021 539 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 LMAN1P49257 510 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CENPAP49450 140 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CAMPP49913 170 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CLCN3P51790 818 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 PMS2P54278 862 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 IKQ13123 557 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 MTX1Q13505 466 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 HSPB2Q16082 182 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ASTE1Q2TB18 679 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 EARS2Q5JPH6 523 aaKnown RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CXorf66Q5JRM2 361 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ENTPD8Q5MY95 495 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 GARNL3Q5VVW2 1013 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 PCSK4Q6UW60 755 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 LCTLQ6UWM7 567 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 Q6ZPA2 131 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 NOXA1Q86UR1 476 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CCDC13Q8IYE1 715 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 AVL9Q8NBF6 648 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 GPR150Q8NGU9 434 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ZNF398Q8TD17 642 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 SARAFQ96BY9 339 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ARHGEF26Q96DR7 871 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 GCNAQ96QF7 691 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ABHD1Q96SE0 405 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 MXRA8Q9BRK3 442 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ANP32EQ9BTT0 268 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 IFIH1Q9BYX4 1025 aaKnown RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 TKTL2Q9H0I9 626 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 OR10A4Q9H209 315 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 PLK3Q9H4B4 646 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 GIMAP4Q9NUV9 329 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 CWC25Q9NXE8 425 aaPredicted RBP4.14□□□□□ -1.75
PTCD3-216ENST00000487043 TAB2Q9NYJ8 693 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 OGFRQ9NZT2 677 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 NARFQ9UHQ1 456 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 PACSIN3Q9UKS6 424 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 RAP2CQ9Y3L5 183 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 TNFRSF18Q9Y5U5 241 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 ARFGEF2Q9Y6D5 1785 aa4.14□□□□□ -1.75
PTCD3-216ENST00000487043 NUP188Q5SRE5 1749 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 A0A096LPK6 155 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 EBAG9O00559 213 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 UBE2CO00762 179 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 SCAMP1O15126 338 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 TPPPO94811 219 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 HSPA4LO95757 839 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 HOXB5P09067 269 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 TMEM11P17152 192 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 SRD5A1P18405 259 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 KRT4P19013 534 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 BMP5P22003 454 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 LMO1P25800 156 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 GPR12P47775 334 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 TMPRSS3P57727 454 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 TUBA4AP68366 448 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 ZBED6P86452 979 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 ROR1Q01973 937 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 STIM1Q13586 685 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 TNFAIP1Q13829 316 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 PKP1Q13835 747 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 CAPSQ13938 189 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 ZNF268Q14587 947 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-216ENST00000487043 PCLAFQ15004 111 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 NAB2Q15742 525 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 TCTN1Q2MV58 587 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 RABL6Q3YEC7 729 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-216ENST00000487043 PARP10Q53GL7 1025 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 ZNF362Q5T0B9 420 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-216ENST00000487043 JADE1Q6IE81 842 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 FBXO46Q6PJ61 603 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-216ENST00000487043 ZNF813Q6ZN06 617 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 FAM47EQ6ZV65 393 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 PPP1R42Q7Z4L9 355 aa4.13□□□□□ -1.75
PTCD3-216ENST00000487043 SERPINA11Q86U17 422 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms