RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TCTN2Q96GX1 697 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 COQ10AQ96MF6 247 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 HERPUD2Q9BSE4 406 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 GPR87Q9BY21 358 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 TRIM55Q9BYV6 548 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 BRD8Q9H0E9 1235 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 ACTL8Q9H568 366 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 SP110Q9HB58 689 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 PDFQ9HBH1 243 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 MLXIPLQ9NP71 852 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 LHX9Q9NQ69 397 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 B4GALT6Q9UBX8 382 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 PADI1Q9ULC6 663 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 ST14Q9Y5Y6 855 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 NUP210LQ5VU65 1888 aa7.6□□□□□ -1.19
PDPN-205ENST00000487038 POLEQ07864 2286 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 TRBV23OR9-2A0A075B6M9 112 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 KIR2DS5A0A0G2JLQ3 304 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 A0A0G2JNG1 304 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 HEATR9A2RTY3 570 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 GOLGA6L4A6NEF3 574 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 ARHGAP42A6NI28 874 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 LILRA5A6NI73 299 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 ARGFXA6NJG6 315 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 OR5K4A6NMS3 321 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 WASH4PA8MWX3 477 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 KIR2DS3K7RE56 304 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 CREB3O43889 395 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 PRAMEF11O60813 436 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 SOCS5O75159 536 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 RASSF9O75901 435 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 HEXIM1O94992 359 aaKnown RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 CPP00450 1065 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 FUCA1P04066 466 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 CYP11B1P15538 503 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 CD44P16070 742 aaKnown RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 ZNF28P17035 718 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 HTR7P34969 479 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 ETV3P41162 512 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 POLD2P49005 469 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 RENBPP51606 427 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 CCL11P51671 97 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 DPTQ07507 201 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 NSUN2Q08J23 767 aaKnown RBP eCLIP7.59□□□□□ -1.19
PDPN-205ENST00000487038 RFTN1Q14699 578 aaPredicted RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 KIR2DS5Q14953 304 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
PDPN-205ENST00000487038 PYCR3Q53H96 274 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 PRR30Q53SZ7 412 aaPredicted RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 C2CD6Q53TS8 623 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 CREBRFQ8IUR6 639 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 IQCKQ8N0W5 287 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 CCDC185Q8N715 623 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 CT55Q8WUE5 264 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 FAM172AQ8WUF8 416 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 RXFP2Q8WXD0 754 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 SNX21Q969T3 373 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 SCARF2Q96GP6 870 aaPredicted RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 C9orf72Q96LT7 481 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 KLC2Q9H0B6 622 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 ING2Q9H160 280 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 NOL6Q9H6R4 1146 aaKnown RBP7.59□□□□□ -1.19
PDPN-205ENST00000487038 DNAJC12Q9UKB3 198 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 ENTPD4Q9Y227 616 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 DCHS2Q6V1P9 2916 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 CROCCQ5TZA2 2017 aa7.59□□□□□ -1.19
PDPN-205ENST00000487038 ARHGAP10A1A4S6 786 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 ANKUB1A6NFN9 424 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 J3KR12 359 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 FOXN3O00409 490 aaPredicted RBP7.58□□□□□ -1.2
PDPN-205ENST00000487038 TRAFD1O14545 582 aaPredicted RBP7.58□□□□□ -1.2
PDPN-205ENST00000487038 SPAG6O75602 509 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 ASMTLO95671 621 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 C9P02748 559 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 FGF5P12034 268 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 F3P13726 295 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 PON1P27169 355 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 RGRP47804 291 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 SEPHS1P49903 392 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 SCNN1BP51168 640 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 HDAC4P56524 1084 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 TPI1P60174 286 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 NOMO3P69849 1222 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 PDE1BQ01064 536 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 CHAF1BQ13112 559 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 CCDC14Q49A88 953 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 TAF3Q5VWG9 929 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 CPZQ66K79 652 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 SLC6A19Q695T7 634 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 ISM2Q6H9L7 571 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 ADAMTSL4Q6UY14 1074 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 USP45Q70EL2 814 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 MARK2Q7KZI7 788 aaKnown RBP7.58□□□□□ -1.2
PDPN-205ENST00000487038 CHST15Q7LFX5 561 aaPredicted RBP7.58□□□□□ -1.2
PDPN-205ENST00000487038 PHYKPLQ8IUZ5 450 aa7.58□□□□□ -1.2
PDPN-205ENST00000487038 FAM71AQ8IYT1 594 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms