RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SSX3Q99909 188 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 ZSCAN5AQ9BUG6 496 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 OSBPL6Q9BZF3 934 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 FAM192AQ9GZU8 254 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 RAB33BQ9H082 229 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 RNF32Q9H0A6 362 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 SMG9Q9H0W8 520 aaKnown RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 C12orf65Q9H3J6 166 aaKnown RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 CENPHQ9H3R5 247 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 NSUN3Q9H649 340 aaKnown RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 GREM2Q9H772 168 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 RMND5AQ9H871 391 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 ZNF395Q9H8N7 513 aaPredicted RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 KLC4Q9NSK0 619 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 DDX28Q9NUL7 540 aaKnown RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 TRNAU1APQ9NX07 287 aaKnown RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 CLEC1BQ9P126 229 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 ASH2LQ9UBL3 628 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 ZNF212Q9UDV6 495 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 KIAA1257Q9ULG3 409 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 DAPP1Q9UN19 280 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 SATB2Q9UPW6 733 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 FCF1Q9Y324 198 aaKnown RBP5.54□□□□□ -1.52
SF1-217ENST00000486960 PCDHB1Q9Y5F3 818 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 PCDHA3Q9Y5H8 950 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 DMRT1Q9Y5R6 373 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 SNX14Q9Y5W7 946 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 U3KQV3 271 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 ADGRG4Q8IZF6 3080 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 PDZD2O15018 2839 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 MYH13Q9UKX3 1938 aa5.54□□□□□ -1.52
SF1-217ENST00000486960 COL5A1P20908 1838 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 CRYBG3Q68DQ2 2970 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 A0A1B0GUL7 405 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 FAM230AA0A1W2PPH8 454 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 PRAMEF27A3QJZ7 478 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 GSAPA4D1B5 854 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SLC15A5A6NIM6 579 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ZNF716A6NP11 495 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 E9PMD0 336 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 WRBO00258 174 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 DNALI1O14645 258 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 TM4SF5O14894 197 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ZNF185O15231 689 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 STRNO43815 780 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ACSL4O60488 711 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ZNF189O75820 626 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 CSTAP01040 98 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 KRT6BP04259 564 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 EIF2S1P05198 315 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 FHP07954 510 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 NR3C2P08235 984 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ZNF735P0CB33 412 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ERVK-10P10266 1014 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CDK4P11802 303 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 PKMP14618 531 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 ZFXP17010 805 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 PRKCAP17252 672 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CKMT2P17540 419 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ADH6P28332 368 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 HOXA6P31267 233 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CTNNB1P35222 781 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 MSX2P35548 267 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 SREBF1P36956 1147 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ARL1P40616 181 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 ETV5P41161 510 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SLC19A1P41440 591 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 KRT6CP48668 564 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 NAGLUP54802 743 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CTSWP56202 376 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SESN2P58004 480 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 VBP1P61758 197 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 UBE2HP62256 183 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CYP4F3Q08477 520 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 TCP10Q12799 353 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 MALLQ13021 153 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SPP2Q13103 211 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 KARSQ15046 597 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 ZNF124Q15973 351 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 TCTN1Q2MV58 587 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 LRRC24Q50LG9 513 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 C4orf17Q53FE4 359 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SLC44A4Q53GD3 710 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 HSP90AA4PQ58FG1 418 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ARSJQ5FYB0 599 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 EFHC2Q5JST6 749 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 APOBEC3HQ6NTF7 200 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 TRIM72Q6ZMU5 477 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 NANOGNBQ7Z5D8 188 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SPATA19Q7Z5L4 167 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 STX12Q86Y82 276 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 MIB1Q86YT6 1006 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 FAM185AQ8N0U4 392 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SMYD1Q8NB12 490 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 DNAJB8Q8NHS0 232 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 PHOSPHO2Q8TCD6 241 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 NETO1Q8TDF5 533 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 ACTRT2Q8TDY3 377 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms