RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 TRIM38O00635 465 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SDC3O75056 442 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SUN1O94901 812 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 FUCA1P04066 466 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 ADRB1P08588 477 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
SF1-216ENST00000486867 GPR1P46091 355 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SEMA5AQ13591 1074 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 LONRF2Q1L5Z9 754 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 ZNF542PQ5EBM4 170 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 N4BP2L1Q5TBK1 243 aaPredicted RBP13.09□□□□□ -0.31
SF1-216ENST00000486867 ZDHHC20Q5W0Z9 365 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 RAET1GQ6H3X3 334 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 ENPP7Q6UWV6 458 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 NYAP1Q6ZVC0 841 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SLC25A41Q8N5S1 370 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 GLIS1Q8NBF1 620 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
SF1-216ENST00000486867 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 TSACCQ96A04 125 aaPredicted RBP13.09□□□□□ -0.31
SF1-216ENST00000486867 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 VPS35Q96QK1 796 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 NAP1L3Q99457 506 aaPredicted RBP13.09□□□□□ -0.31
SF1-216ENST00000486867 TBL1YQ9BQ87 522 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 ZSCAN5AQ9BUG6 496 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 DUSP23Q9BVJ7 150 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 BOCQ9BWV1 1114 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 GPR63Q9BZJ6 419 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SLC13A1Q9BZW2 595 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
SF1-216ENST00000486867 VPS18Q9P253 973 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 PAK5Q9P286 719 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 U3KQA8 63 aa13.09□□□□□ -0.31
SF1-216ENST00000486867 SPAARA0A1B0GVQ0 90 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 PGRMC1O00264 195 aaKnown RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 GAPDHSO14556 408 aaPredicted RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 FANCGO15287 622 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 TCP1P17987 556 aaKnown RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 PMLP29590 882 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 RPL22P35268 128 aaKnown RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 OLIG2Q13516 323 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 SNX1Q13596 522 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 FAXCQ5TGI0 409 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 HID1Q8IV36 788 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 EID2Q8N6I1 236 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 MS4A14Q96JA4 679 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 ETNK1Q9HBU6 452 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 EIF2B3Q9NR50 452 aaKnown RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 TRNAU1APQ9NX07 287 aaKnown RBP13.08□□□□□ -0.32
SF1-216ENST00000486867 FTSJ1Q9UET6 329 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 TMPRSS11EQ9UL52 423 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 NEU2Q9Y3R4 380 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 PCDHGA1Q9Y5H4 931 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 AKAP13Q12802 2813 aa13.08□□□□□ -0.32
SF1-216ENST00000486867 SPEGQ15772 3267 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 MED19A0JLT2 244 aaPredicted RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 AGAP14A8MT82 685 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 GPR89AB7ZAQ6 455 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 LDB2O43679 373 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 USP12O75317 370 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 LDOC1O95751 146 aaPredicted RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 TNFP01375 233 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 GPR89BP0CG08 455 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ALPPL2P10696 532 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ACP1P24666 158 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 MAGEA6P43360 314 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ACADVLP49748 655 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 SIM1P81133 766 aaPredicted RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 SHC2P98077 582 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ELOCQ15369 112 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 TTC27Q6P3X3 843 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 GLT6D1Q7Z4J2 308 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 LINC00523Q86TU6 105 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 SLCO6A1Q86UG4 719 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 BLOC1S5Q8TDH9 187 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 GPBAR1Q8TDU6 330 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 ADAMTS14Q8WXS8 1223 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 LRRC45Q96CN5 670 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 CNDP2Q96KP4 475 aaKnown RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 RMI1Q9H9A7 625 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 IL26Q9NPH9 171 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 MRPL40Q9NQ50 206 aaKnown RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 SMOXQ9NWM0 555 aa13.07□□□□□ -0.32
SF1-216ENST00000486867 OAS3Q9Y6K5 1087 aaKnown RBP13.07□□□□□ -0.32
SF1-216ENST00000486867 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms