RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 SLC17A9Q9BYT1 436 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 FAM83DQ9H4H8 585 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 VPS37BQ9H9H4 285 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 EBF2Q9HAK2 575 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 SMYD2Q9NRG4 433 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 KCTD5Q9NXV2 234 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 CD84Q9UIB8 345 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 APPL1Q9UKG1 709 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PLXNA2O75051 1894 aa9.53□□□□□ -0.88
MCF2L-227ENST00000486806 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.88
MCF2L-227ENST00000486806 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 GOLGA8KD6RF30 607 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 GOLGA8TH3BQL2 631 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 K7ESM1 405 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 RAD51BO15315 384 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 PAK4O96013 591 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 NUDT17P0C025 328 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 PRSS56P0CW18 603 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ERVK-10P10266 1014 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ITGALP20701 1170 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 OGNP20774 298 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 HNRNPA2B1P22626 353 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 MAT2AP31153 395 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 PHBP35232 272 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 IGFALSP35858 605 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 NUDT1P36639 197 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SLC1A2P43004 574 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 CACNG1Q06432 222 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 MGAT5Q09328 741 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SEMA3AQ14563 771 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 EFTUD2Q15029 972 aaKnown RBP eCLIP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 LRRC14Q15048 493 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 IRF4Q15306 451 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ANGPT1Q15389 498 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SMAD1Q15797 465 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 CHRNA6Q15825 494 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 TYSND1Q2T9J0 566 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ATP13A5Q4VNC0 1218 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SETMARQ53H47 684 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 HSP90AA5PQ58FG0 334 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 PSAPL1Q6NUJ1 521 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ADAMTSL4Q6UY14 1074 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SNX20Q7Z614 316 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 CILP2Q8IUL8 1156 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SLC41A1Q8IVJ1 513 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 LMNTD2Q8IXW0 634 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 PIANPQ8IYJ0 282 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 TMEM145Q8NBT3 493 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ZBTB44Q8NCP5 570 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 GPR150Q8NGU9 434 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 OR4L1Q8NH43 312 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 FBF1Q8TES7 1133 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 GAB3Q8WWW8 586 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SCG3Q8WXD2 468 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 BIRC7Q96CA5 298 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 VPS35Q96QK1 796 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 FAM167BQ9BTA0 163 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 C1QTNF7Q9BXJ2 289 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ACSS3Q9H6R3 686 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 MBNL1Q9NR56 388 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 CATSPERZQ9NTU4 200 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 C20orf96Q9NUD7 363 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 ARGLU1Q9NWB6 273 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 MARCH4Q9P2E8 410 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 SLC17A6Q9P2U8 582 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 TMPRSS11EQ9UL52 423 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 INVSQ9Y283 1065 aa9.52□□□□□ -0.89
MCF2L-227ENST00000486806 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
MCF2L-227ENST00000486806 DMDP11532 3685 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 ZDBF2Q9HCK1 2354 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 IGLV3-16A0A075B6K0 115 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 A0A087WUV0 522 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-227ENST00000486806 A0A1W2PPC4 97 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 METTL12A8MUP2 240 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 CXorf49A8MYA2 514 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-227ENST00000486806 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-227ENST00000486806 FSBPO95073 299 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 PCCBP05166 539 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 PYGLP06737 847 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 SP9P0CG40 484 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 TRIM23P36406 574 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 CDKN1CP49918 316 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-227ENST00000486806 RPL6Q02878 288 aaKnown RBP9.51□□□□□ -0.89
MCF2L-227ENST00000486806 SGCGQ13326 291 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 NAB1Q13506 487 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 ITGA9Q13797 1035 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 SLC29A2Q14542 456 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 KBTBD12Q3ZCT8 623 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 GPR33Q49SQ1 333 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 AARS2Q5JTZ9 985 aaKnown RBP9.51□□□□□ -0.89
MCF2L-227ENST00000486806 TEDDM1Q5T9Z0 273 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 PMS2CLQ68D20 193 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF470Q6ECI4 717 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 RAET1GQ6H3X3 334 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 NEPROQ6NW34 567 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 PNCKQ6P2M8 343 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 GCNT7Q6ZNI0 430 aa9.51□□□□□ -0.89
MCF2L-227ENST00000486806 MARK2Q7KZI7 788 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms