RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SETMARQ53H47 684 aaPredicted RBP11.91□□□□□ -0.5
PKP4-213ENST00000486254 ZNF678Q5SXM1 525 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 ATXN7L2Q5T6C5 722 aaPredicted RBP11.91□□□□□ -0.5
PKP4-213ENST00000486254 PLPP4Q5VZY2 271 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 C22orf39Q6P5X5 142 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 RAB44Q7Z6P3 723 aaPredicted RBP11.91□□□□□ -0.5
PKP4-213ENST00000486254 PIM3Q86V86 326 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 CHCHD4Q8N4Q1 142 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 RBM15BQ8NDT2 890 aaKnown RBP11.91□□□□□ -0.5
PKP4-213ENST00000486254 MAPK15Q8TD08 544 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 DTX3LQ8TDB6 740 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 PTERQ96BW5 349 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 ANKRD27Q96NW4 1050 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 GPR63Q9BZJ6 419 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 GSTO2Q9H4Y5 243 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 ALG9Q9H6U8 611 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 MEAF6Q9HAF1 191 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 ZFYVE1Q9HBF4 777 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 KLHL42Q9P2K6 505 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 ZDHHC2Q9UIJ5 367 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 PLA2G4CQ9UP65 541 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 STK38LQ9Y2H1 464 aa11.91□□□□□ -0.5
PKP4-213ENST00000486254 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 B2RBV5 119 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 PRMT5O14744 637 aaPredicted RBP11.9□□□□□ -0.5
PKP4-213ENST00000486254 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.5
PKP4-213ENST00000486254 BUD23O43709 281 aaKnown RBP11.9□□□□□ -0.5
PKP4-213ENST00000486254 ZBTB14O43829 449 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 TM7SF2O76062 418 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 FGF4P08620 206 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 MTHFD2P13995 350 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 ITGALP20701 1170 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 KCNA5P22460 613 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 CPOXP36551 454 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 ABL2P42684 1182 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 BTKQ06187 659 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
PKP4-213ENST00000486254 PTPRNQ16849 979 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 GRAMD4Q6IC98 578 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 PSAPL1Q6NUJ1 521 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 TXNDC11Q6PKC3 985 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 RINLQ6ZS11 566 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 LYSMD3Q7Z3D4 306 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 SNX20Q7Z614 316 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 PIANPQ8IYJ0 282 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 EFHBQ8N7U6 833 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 CEP70Q8NHQ1 597 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 IRF7Q92985 503 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 VOPP1Q96AW1 172 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 RNPEPL1Q9HAU8 725 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 SLC25A13Q9UJS0 675 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
PKP4-213ENST00000486254 UBA6A0AVT1 1052 aaPredicted RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 K7ERQ8 282 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 NRG2O14511 850 aaPredicted RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 POP4O95707 220 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 TSPAN12O95859 305 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 PABPC1P11940 636 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 ZNF7P17097 686 aaPredicted RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 CCNG1P51959 295 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 PGGT1BP53609 377 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 KLF10Q13118 480 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 CAMK1Q14012 370 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 TEAD2Q15562 447 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 FUT11Q495W5 492 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 CTSL3PQ5NE16 218 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 TPRG1Q6ZUI0 275 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 USP45Q70EL2 814 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 CUZD1Q86UP6 607 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 CAMK1DQ8IU85 385 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 RBFAQ8N0V3 343 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 SPATA6LQ8N4H0 392 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 RP9Q8TA86 221 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 CD200R1Q8TD46 325 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 SCRN2Q96FV2 425 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 RTKNQ9BST9 563 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 TM6SF2Q9BZW4 377 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 NDE1Q9NXR1 346 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 NFKBIL1Q9UBC1 381 aaPredicted RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 EVLQ9UI08 416 aaPredicted RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 TRMT6Q9UJA5 497 aaKnown RBP11.89□□□□□ -0.51
PKP4-213ENST00000486254 CLEC4EQ9ULY5 219 aa11.89□□□□□ -0.51
PKP4-213ENST00000486254 TSPAN11A1L157 253 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 NEMP2A6NFY4 417 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 EIF3FO00303 357 aaPredicted RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 SDHDO14521 159 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 GAPDHSO14556 408 aaPredicted RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
PKP4-213ENST00000486254 PEX11AO75192 247 aa11.88□□□□□ -0.51
PKP4-213ENST00000486254 SLC4A1P02730 911 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms