RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NXPE1Q8N323 547 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 SFRP1Q8N474 314 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 PLPP7Q8NBV4 271 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 KAT5Q92993 513 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 RELTQ969Z4 430 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 HDAC11Q96DB2 347 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 ELMO2Q96JJ3 720 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 C1orf74Q96LT6 269 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 GDAP1L1Q96MZ0 367 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 OR6C1Q96RD1 312 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 TTYH3Q9C0H2 523 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 TKTL2Q9H0I9 626 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 ETNK1Q9HBU6 452 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 CHST11Q9NPF2 352 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 ASNSD1Q9NWL6 643 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 GPR83Q9NYM4 423 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 C5AR2Q9P296 337 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 SERTAD1Q9UHV2 236 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 MKL2Q9ULH7 1088 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 SUFUQ9UMX1 484 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 TRBV23OR9-2A0A075B6M9 112 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 A0A1B0GUH1 482 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 CFAP69A5D8W1 941 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 A6NL46 340 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 PDE2AO00408 941 aaPredicted RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 POLR2DO15514 142 aaKnown RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 HSF2BPO75031 334 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 GRAP2O75791 330 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 TMCC1O94876 653 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 TMEM63AO94886 807 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 PIGNO95427 931 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 C9P02748 559 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 THBS1P07996 1170 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 XPAP23025 273 aaPredicted RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 ACTR1BP42025 376 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 GFERP55789 205 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 ACTR1AP61163 376 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 LRMPQ12912 555 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 ZNF235Q14590 738 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 TLR1Q15399 786 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.19□□□□□ -1.1
XRN1-212ENST00000486211 ANO6Q4KMQ2 910 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 ZCWPW2Q504Y3 356 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 BRMS1LQ5PSV4 323 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 FAM199XQ6PEV8 388 aaPredicted RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 IGFL3Q6UXB1 125 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 LRRC31Q6UY01 552 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 LIPIQ6XZB0 460 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 CUZD1Q86UP6 607 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 HOMEZQ8IX15 550 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 DRC7Q8IY82 874 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 CBARPQ8N350 705 aaPredicted RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 GUF1Q8N442 669 aaKnown RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 NETO2Q8NC67 525 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 HCAR2Q8TDS4 363 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 TEX101Q9BY14 249 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 EXOC1Q9NV70 894 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 NDFIP2Q9NV92 336 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
XRN1-212ENST00000486211 SMC3Q9UQE7 1217 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 ATP8A1Q9Y2Q0 1164 aa8.19□□□□□ -1.1
XRN1-212ENST00000486211 ZGRF1Q86YA3 2104 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 ACANP16112 2415 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 FAM221AA4D161 298 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 TMEM200CA6NKL6 621 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 SHISA8B8ZZ34 492 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 F5H423 210 aaPredicted RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 KCNN4O15554 427 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 TEX33O43247 280 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 STX10O60499 249 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 F9P00740 461 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 MT-ND3P03897 115 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 IVLP07476 585 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 PLEKP08567 350 aaPredicted RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 EDN3P14138 238 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 POLD2P49005 469 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 PPM1FP49593 454 aaPredicted RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 EPHA4P54764 986 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 GEMIN4P57678 1058 aaKnown RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 HHEXQ03014 270 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 PDCLQ13371 301 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 ADAM9Q13443 819 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 PEX6Q13608 980 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 RAPSNQ13702 412 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 LBRQ14739 615 aaKnown RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 MEA1Q16626 185 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 ERAP2Q6P179 960 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 DUS1LQ6P1R4 473 aaKnown RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 Q6ZS92 163 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 EDARADDQ8WWZ3 215 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 C14orf79Q96F83 325 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 C9orf72Q96LT7 481 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 NPY6RQ99463 290 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 ZYG11BQ9C0D3 744 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 ILKAPQ9H0C8 392 aaPredicted RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 GSX1Q9H4S2 264 aaPredicted RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 WDCPQ9H6R7 721 aa8.18□□□□□ -1.1
XRN1-212ENST00000486211 SARS2Q9NP81 518 aaKnown RBP8.18□□□□□ -1.1
XRN1-212ENST00000486211 AGPAT4Q9NRZ5 378 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms