RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 C20orf96Q9NUD7 363 aaPredicted RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 SLC30A1Q9Y6M5 507 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 NUMA1Q14980 2115 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 CCDC151A5D8V7 595 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 ERLIN1O75477 346 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 PRAMEF1O95521 474 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 ACSL3O95573 720 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 KCNA4P22459 653 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 HNRNPA2B1P22626 353 aaKnown RBP17.48■□□□□ 0.39
CHMP3-207ENST00000485465 IRF4Q15306 451 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 PDPK2PQ6A1A2 396 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 TRMT10BQ6PF06 316 aaKnown RBP17.48■□□□□ 0.39
CHMP3-207ENST00000485465 CYS1Q717R9 158 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 LPCAT2Q7L5N7 544 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 PTAR1Q7Z6K3 402 aaPredicted RBP17.48■□□□□ 0.39
CHMP3-207ENST00000485465 SLC41A1Q8IVJ1 513 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 TMEFF1Q8IYR6 380 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 PELI3Q8N2H9 469 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 ZBTB44Q8NCP5 570 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 DENND6BQ8NEG7 585 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 ZNF398Q8TD17 642 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 FOXJ1Q92949 421 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 CERS2Q96G23 380 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 ZSCAN5AQ9BUG6 496 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 FZD3Q9NPG1 666 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 MOCS1Q9NZB8 636 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 IL1RAPL1Q9NZN1 696 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 DMTF1Q9Y222 760 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 EML5Q05BV3 1969 aa17.48■□□□□ 0.39
CHMP3-207ENST00000485465 LRRK1Q38SD2 2015 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UQCRHLA0A096LP55 91 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 A0A1W2PPC4 97 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 TCRBV9S1A1TA0A576 114 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 GOLGA8KD6RF30 607 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 GOLGA8TH3BQL2 631 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 K7ESM1 405 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 RIPK2O43353 540 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A9O60656 530 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 SOD1P00441 154 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 PCCBP05166 539 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UQCRHP07919 91 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ERVK-10P10266 1014 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A6P19224 532 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ITGALP20701 1170 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A1P22309 533 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A4P22310 534 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 AKT2P31751 481 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 FOXN2P32314 431 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 PHBP35232 272 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A3P35503 534 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A5P35504 534 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 GPR1P46091 355 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 CACNG1Q06432 222 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 NFATC2Q13469 925 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 THOC5Q13769 683 aaKnown RBP17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ITGA9Q13797 1035 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 SMAD1Q15797 465 aaKnown RBP17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ATP13A5Q4VNC0 1218 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ZRANB3Q5FWF4 1079 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 SPDYCQ5MJ68 293 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 RAET1GQ6H3X3 334 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 NEPROQ6NW34 567 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 PNCKQ6P2M8 343 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 SNX20Q7Z614 316 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 KCNMB4Q86W47 210 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 PLA2G15Q8NCC3 412 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 SNX19Q92543 992 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 HSPA12BQ96MM6 686 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ORAI3Q9BRQ5 295 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 FAM96AQ9H5X1 160 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 ASB8Q9H765 288 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A7Q9HAW7 530 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A10Q9HAW8 530 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 UGT1A8Q9HAW9 530 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
CHMP3-207ENST00000485465 CATSPERZQ9NTU4 200 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
CHMP3-207ENST00000485465 MEI4A8MW99 385 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 FADS2P1A8MWK0 482 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 PRAMEF26H0Y7S4 382 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 CD3EAPO15446 510 aaKnown RBP17.46■□□□□ 0.39
CHMP3-207ENST00000485465 PYGLP06737 847 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 PRSS56P0CW18 603 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 CD27P26842 260 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 TEAD1P28347 426 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 STX2P32856 288 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 IGFALSP35858 605 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 CDKN1CP49918 316 aaPredicted RBP17.46■□□□□ 0.39
CHMP3-207ENST00000485465 MGAT5Q09328 741 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 INPP5AQ14642 412 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 GPR33Q49SQ1 333 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 FASTKD1Q53R41 847 aaKnown RBP17.46■□□□□ 0.39
CHMP3-207ENST00000485465 HSP90AA5PQ58FG0 334 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 ZNF449Q6P9G9 518 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 ADAMTSL4Q6UY14 1074 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 GPR150Q8NGU9 434 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 FBF1Q8TES7 1133 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 HNRNPLLQ8WVV9 542 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms