RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RIOK2Q9BVS4 552 aaKnown RBP19.13■□□□□ 0.65
COL27A1-205ENST00000485397 B3GNT4Q9C0J1 378 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 RBM22Q9NW64 420 aaKnown RBP eCLIP19.13■□□□□ 0.657e-12■□□□□ 10.2
COL27A1-205ENST00000485397 KCNK4Q9NYG8 393 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 PCYT1BQ9Y5K3 369 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-205ENST00000485397 A0A1W2PQJ5 194 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-205ENST00000485397 MATN3O15232 486 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 CLDN7O95471 211 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 ASMTLO95671 621 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 ITGB2P05107 769 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 SERPING1P05155 500 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 ZNF30P17039 623 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 PBX1P40424 430 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 FANCCQ00597 558 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 NIPAL4Q0D2K0 466 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 TRA2AQ13595 282 aaKnown RBP eCLIP19.12■□□□□ 0.65
COL27A1-205ENST00000485397 PEX6Q13608 980 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 PAFAH1B3Q15102 231 aaKnown RBP19.12■□□□□ 0.65
COL27A1-205ENST00000485397 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 TBR1Q16650 682 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 HADHQ16836 314 aaKnown RBP19.12■□□□□ 0.65
COL27A1-205ENST00000485397 ALG1LQ6GMV1 187 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 ZNF765Q7L2R6 523 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 PRICKLE2Q7Z3G6 844 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 OR4D9Q8NGE8 314 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 ARRDC2Q8TBH0 407 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 COX14Q96I36 57 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 TAAR9Q96RI9 348 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 TDRD1Q9BXT4 1180 aaKnown RBP19.12■□□□□ 0.65
COL27A1-205ENST00000485397 PRKAB1Q9Y478 270 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 TTLL3Q9Y4R7 772 aa19.12■□□□□ 0.65
COL27A1-205ENST00000485397 STMND1H3BQB6 276 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 EML2O95834 649 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 FAM87AP0C7U9 286 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 THRAP10827 490 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 NFKB2Q00653 900 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 SQSTM1Q13501 440 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 ANKRD20A8PQ5CZ79 823 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 TIGD7Q6NT04 549 aaPredicted RBP19.11■□□□□ 0.65
COL27A1-205ENST00000485397 ALKBH5Q6P6C2 394 aaKnown RBP19.11■□□□□ 0.65
COL27A1-205ENST00000485397 GALNT13Q8IUC8 556 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 NRSN1Q8IZ57 195 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 ZSCAN1Q8NBB4 408 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 LPCAT1Q8NF37 534 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 SLC37A2Q8TED4 501 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 ART4Q93070 314 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 OCIAD1Q9NX40 245 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 PCDHGA3Q9Y5H0 932 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 B3GALT1Q9Y5Z6 326 aa19.11■□□□□ 0.65
COL27A1-205ENST00000485397 OAS3Q9Y6K5 1087 aaKnown RBP19.11■□□□□ 0.65
COL27A1-205ENST00000485397 SDK2Q58EX2 2172 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 SETXQ7Z333 2677 aaKnown RBP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 ATP1A1P05023 1023 aaKnown RBP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 HLA-DQB2P05538 268 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 PYGLP06737 847 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 ITGB6P18564 788 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 CCNCP24863 283 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 CSTF2P33240 577 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 ZBED6P86452 979 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 IFI16Q16666 785 aaKnown RBP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 TMEM71Q6P5X7 295 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 XKR5Q6UX68 686 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 KCTD6Q8NC69 237 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 AGBL5Q8NDL9 886 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 EXD1Q8NHP7 514 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 ZNF564Q8TBZ8 553 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 NKD1Q969G9 470 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 TSGA13Q96PP4 275 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 WDR24Q96S15 920 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 FAM117AQ9C073 453 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 CBX8Q9HC52 389 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 PCDH9Q9HC56 1237 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 ZNHIT2Q9UHR6 403 aa19.1■□□□□ 0.65
COL27A1-205ENST00000485397 CNOT6Q9ULM6 557 aaKnown RBP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 HEMK1Q9Y5R4 338 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-205ENST00000485397 DNAJC6O75061 913 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 CES1P23141 567 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 FASLGP48023 281 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 PPM1FP49593 454 aaPredicted RBP19.09■□□□□ 0.65
COL27A1-205ENST00000485397 UBASH3AP57075 661 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 TAS2R40P59535 323 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 GBE1Q04446 702 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 LRP8Q14114 963 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 LUZP1Q86V48 1076 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 SFRP1Q8N474 314 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 PQLC3Q8N755 202 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 SLC38A3Q99624 504 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 ZNF670Q9BS34 389 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 ZMYND15Q9H091 742 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 STARD5Q9NSY2 213 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 SLC39A1Q9NY26 324 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 CAPN11Q9UMQ6 739 aa19.09■□□□□ 0.65
COL27A1-205ENST00000485397 EFCAB7A8K855 629 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 WISP1O95388 367 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 UGT1A3P35503 534 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 ATP1A2P50993 1020 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 GPLD1P80108 840 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 KCNC4Q03721 635 aa19.08■□□□□ 0.64
COL27A1-205ENST00000485397 SLC10A2Q12908 348 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms