RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 PCOLCE2Q9UKZ9 415 aa10.78□□□□□ -0.68
DDX56-212ENST00000485367 WASF3Q9UPY6 502 aa10.78□□□□□ -0.68
DDX56-212ENST00000485367 MTO1Q9Y2Z2 717 aaKnown RBP10.78□□□□□ -0.68
DDX56-212ENST00000485367 FCF1Q9Y324 198 aaKnown RBP10.78□□□□□ -0.68
DDX56-212ENST00000485367 ACTL7AQ9Y615 435 aa10.78□□□□□ -0.68
DDX56-212ENST00000485367 GMEB1Q9Y692 573 aa10.78□□□□□ -0.68
DDX56-212ENST00000485367 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
DDX56-212ENST00000485367 CHD5Q8TDI0 1954 aa10.78□□□□□ -0.68
DDX56-212ENST00000485367 RNF103O00237 685 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 HGSO14964 777 aaPredicted RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 LATO43561 262 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 RAMP2O60895 175 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 RNGTTO60942 597 aaKnown RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 CBFA2T3O75081 653 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 ZNF821O75541 412 aaPredicted RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 DESP17661 470 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 KRT15P19012 456 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 GCAP28676 217 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 TPP2P29144 1249 aaPredicted RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 L1CAMP32004 1257 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 CETN2P41208 172 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 CCT8P50990 548 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 RAP1GDS1P52306 607 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 OGDHQ02218 1023 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 SCAPQ12770 1279 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 POLD3Q15054 466 aaPredicted RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 ZNF423Q2M1K9 1284 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 CARD16Q5EG05 197 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 PIP5KL1Q5T9C9 394 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 RNF220Q5VTB9 566 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 NAPEPLDQ6IQ20 393 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 ZNF354CQ86Y25 554 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 RYBPQ8N488 228 aaPredicted RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 PCDH20Q8N6Y1 951 aaKnown RBP10.77□□□□□ -0.68
DDX56-212ENST00000485367 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 MCUR1Q96AQ8 359 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 VCPIP1Q96JH7 1222 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 OLFM3Q96PB7 478 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 MIPEPQ99797 713 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 TRIM55Q9BYV6 548 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 MAGEH1Q9H213 219 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 RETREG1Q9H6L5 497 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 PARVAQ9NVD7 372 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 NEU3Q9UQ49 428 aa10.77□□□□□ -0.68
DDX56-212ENST00000485367 A0A1W2PR77 199 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 GYG2O15488 501 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 FLRT2O43155 660 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 CREB3O43889 395 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 DFNA5O60443 496 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 MAGEC1O60732 1142 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 LEFTY1O75610 366 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 TRIM16O95361 564 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 FTH1P19P0C7X4 201 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 PSMA2P25787 234 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 TAS2R38P59533 333 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 MAMLD1Q13495 774 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 MORF4L2Q15014 288 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 DBN1Q16643 649 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 ST3GAL2Q16842 350 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 SETMARQ53H47 684 aaPredicted RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 ERN2Q76MJ5 926 aaKnown RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 ZC3H18Q86VM9 953 aaKnown RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 TRIM69Q86WT6 500 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 MYLK4Q86YV6 388 aaPredicted RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 CHCHD4Q8N4Q1 142 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 PNPLA1Q8N8W4 532 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 KLK6Q92876 244 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 C9orf72Q96LT7 481 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 HEPHQ9BQS7 1158 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 OSBPL8Q9BZF1 889 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 TM6SF2Q9BZW4 377 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 ZWILCHQ9H900 591 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 PREBQ9HCU5 417 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 SLCO1B3Q9NPD5 702 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 HECAQ9UBI9 543 aaPredicted RBP10.77□□□□□ -0.69
DDX56-212ENST00000485367 FZD10Q9ULW2 581 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 DMTF1Q9Y222 760 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 BTBD3Q9Y2F9 522 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 AKAP13Q12802 2813 aa10.77□□□□□ -0.69
DDX56-212ENST00000485367 A0A1W2PQU0 124 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 TLR4O00206 839 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 DNALI1O14645 258 aaPredicted RBP10.76□□□□□ -0.69
DDX56-212ENST00000485367 KDELR3O43731 214 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 SPAG7O75391 227 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 PCDH8O95206 1070 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 CD160O95971 181 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 TSHRP16473 764 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 RPA3P35244 121 aaPredicted RBP10.76□□□□□ -0.69
DDX56-212ENST00000485367 NUDT1P36639 197 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 POLE2P56282 527 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 GEMIN4P57678 1058 aaKnown RBP10.76□□□□□ -0.69
DDX56-212ENST00000485367 ACSBG2Q5FVE4 666 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 PLEKHA7Q6IQ23 1121 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 DBX2Q6ZNG2 339 aa10.76□□□□□ -0.69
DDX56-212ENST00000485367 KATNAL2Q8IYT4 538 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms