RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PCSK4Q6UW60 755 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 CCDC81Q6ZN84 652 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 USP53Q70EK8 1073 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 TMPRSS9Q7Z410 1059 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 ZNF438Q7Z4V0 828 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 PIM3Q86V86 326 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 VSIG1Q86XK7 387 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 JAMLQ86YT9 394 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 VSTM4Q8IW00 320 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 SLITRK4Q8IW52 837 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 NAGSQ8N159 534 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 PLD5Q8N7P1 536 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 LPCAT1Q8NF37 534 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 WBP1Q96G27 269 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 COX14Q96I36 57 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 CCDC42Q96M95 316 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 OR2M4Q96R27 311 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 CMKLR1Q99788 373 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 MLPHQ9BV36 600 aaPredicted RBP9.38□□□□□ -0.91
NUP50-215ENST00000484186 RIOK2Q9BVS4 552 aaKnown RBP9.38□□□□□ -0.91
NUP50-215ENST00000484186 MAK16Q9BXY0 300 aaKnown RBP9.38□□□□□ -0.91
NUP50-215ENST00000484186 CDH19Q9H159 772 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 SEMA6CQ9H3T2 930 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 NHEJ1Q9H9Q4 299 aaPredicted RBP9.38□□□□□ -0.91
NUP50-215ENST00000484186 ABHD10Q9NUJ1 306 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 PISDQ9UG56 409 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 ACSL6Q9UKU0 697 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 PLEKHM1Q9Y4G2 1056 aa9.38□□□□□ -0.91
NUP50-215ENST00000484186 ARHGEF17Q96PE2 2063 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 C1orf232A0A0U1RR37 186 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 RGSL1A5PLK6 1076 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 C3orf70A6NLC5 250 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 KCNK1O00180 336 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 AGRPO00253 132 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 APOL1O14791 398 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 PPM1DO15297 605 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 INPP4BO15327 924 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 MFAP3LO75121 409 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 C1QL1O75973 258 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 MTA2O94776 668 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 ASMTLO95671 621 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 MMP2P08253 660 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 ITIH1P19827 911 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 CD1CP29017 333 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 SPINT3P49223 89 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 IFI35P80217 286 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 AP1B1Q10567 949 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 ZBTB17Q13105 803 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 LRP8Q14114 963 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 QPCTQ16769 361 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 PHF19Q5T6S3 580 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 SLC9A4Q6AI14 798 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 ZNF574Q6ZN55 896 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 MARK2Q7KZI7 788 aaKnown RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 GALNT13Q8IUC8 556 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 RHOT2Q8IXI1 618 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 CNTD1Q8N815 330 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 CCHCR1Q8TD31 782 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 PATE1Q8WXA2 126 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 WDR24Q96S15 920 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 CCNL2Q96S94 520 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 ADGRE3Q9BY15 652 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 FAM83DQ9H4H8 585 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 RDH14Q9HBH5 336 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 SPTLC3Q9NUV7 552 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 PKD2L2Q9NZM6 624 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 AKAP7Q9P0M2 348 aaPredicted RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 ZNHIT2Q9UHR6 403 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 CNOT6Q9ULM6 557 aaKnown RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 HEY1Q9Y5J3 304 aa9.37□□□□□ -0.91
NUP50-215ENST00000484186 FASNP49327 2511 aaKnown RBP9.37□□□□□ -0.91
NUP50-215ENST00000484186 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 TRBV23OR9-2A0A075B6M9 112 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 IGHV5-10-1A0A0J9YXX1 117 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 EFSO43281 561 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 DNAJC6O75061 913 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 ZFXP17010 805 aaPredicted RBP9.36□□□□□ -0.91
NUP50-215ENST00000484186 ETV5P41161 510 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 SLC1A1P43005 524 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 MAPK10P53779 464 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 CFHR1Q03591 330 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 SQSTM1Q13501 440 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 C16orf72Q14CZ0 275 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 PDK1Q15118 436 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 HENMT1Q5T8I9 393 aaKnown RBP9.36□□□□□ -0.91
NUP50-215ENST00000484186 LRRC38Q5VT99 294 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 NPNTQ6UXI9 565 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 NT5DC3Q86UY8 548 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 TTC9Q92623 222 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 USP7Q93009 1102 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 RNF25Q96BH1 459 aaPredicted RBP9.36□□□□□ -0.91
NUP50-215ENST00000484186 DPYSL5Q9BPU6 564 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 NUDT22Q9BRQ3 303 aa9.36□□□□□ -0.91
NUP50-215ENST00000484186 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms