RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TMEM9Q9P0T7 183 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 OAS3Q9Y6K5 1087 aaKnown RBP17.93■□□□□ 0.46
ATG4B-221ENST00000483778 BOD1L1Q8NFC6 3051 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 CPNE6O95741 557 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 ATP1A1P05023 1023 aaKnown RBP17.92■□□□□ 0.46
ATG4B-221ENST00000483778 CCNCP24863 283 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
ATG4B-221ENST00000483778 HADHQ16836 314 aaKnown RBP17.92■□□□□ 0.46
ATG4B-221ENST00000483778 LINC00303Q3SY05 128 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 LRRC49Q8IUZ0 686 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 FAF2Q96CS3 445 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 COX14Q96I36 57 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 POLR1EQ9GZS1 481 aaKnown RBP17.92■□□□□ 0.46
ATG4B-221ENST00000483778 KCTD5Q9NXV2 234 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 CTTNBP2NLQ9P2B4 639 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 TTLL3Q9Y4R7 772 aa17.92■□□□□ 0.46
ATG4B-221ENST00000483778 JCHAINP01591 159 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 FGF3P11487 239 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-221ENST00000483778 CSF2RBP32927 897 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 ACTR1BP42025 376 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 ACTR1AP61163 376 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 ASTE1Q2TB18 679 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-221ENST00000483778 MAP9Q49MG5 647 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 B4GALNT4Q76KP1 1039 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 CNTD1Q8N815 330 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 JPH3Q8WXH2 748 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-221ENST00000483778 EID2BQ96D98 161 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 CCDC74BQ96LY2 380 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 OR2M4Q96R27 311 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 CMKLR1Q99788 373 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 TDRD1Q9BXT4 1180 aaKnown RBP17.91■□□□□ 0.46
ATG4B-221ENST00000483778 XPO4Q9C0E2 1151 aaKnown RBP17.91■□□□□ 0.46
ATG4B-221ENST00000483778 DTLQ9NZJ0 730 aa17.91■□□□□ 0.46
ATG4B-221ENST00000483778 IGHV1OR21-1A0A087WYE8 117 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 CAPN8A6NHC0 703 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 FADS2P1A8MWK0 482 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 KCNK1O00180 336 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 KDELR1P24390 212 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 HNRNPH3P31942 346 aaKnown RBP17.9■□□□□ 0.46
ATG4B-221ENST00000483778 EPHB1P54762 984 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 CYP4F2P78329 520 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 QPCTQ16769 361 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 NLRP8Q86W28 1048 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 DTX1Q86Y01 620 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 LPCAT1Q8NF37 534 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 ZNF670Q9BS34 389 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 BRD8Q9H0E9 1235 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 PCDH9Q9HC56 1237 aa17.9■□□□□ 0.46
ATG4B-221ENST00000483778 C3orf70A6NLC5 250 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-221ENST00000483778 DNAJC6O75061 913 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 LIPCP11150 499 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 NFKBIAP25963 317 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 LIMK2P53671 638 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 ZBTB17Q13105 803 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 MESDQ14696 234 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 PDK2Q15119 407 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 ZNF648Q5T619 568 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-221ENST00000483778 ZNF765Q7L2R6 523 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 CCNYQ8ND76 341 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 EXTL1Q92935 676 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 FATE1Q969F0 183 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 TMEM159Q96B96 161 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 MED8Q96G25 268 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 RNF157Q96PX1 679 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 CEP41Q9BYV8 373 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 ARFGAP3Q9NP61 516 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 ZNHIT2Q9UHR6 403 aa17.89■□□□□ 0.45
ATG4B-221ENST00000483778 TLN1Q9Y490 2541 aaKnown RBP17.88■□□□□ 0.45
ATG4B-221ENST00000483778 ASMTLO95671 621 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 ZNF30P17039 623 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 CD86P42081 329 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 GPR3P46089 330 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 SPINT3P49223 89 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 TPM4P67936 248 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 SQSTM1Q13501 440 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 TIGD7Q6NT04 549 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-221ENST00000483778 NPNTQ6UXI9 565 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 KDELC2Q7Z4H8 507 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 NRSN1Q8IZ57 195 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 NDUFAF2Q8N183 169 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 PLD5Q8N7P1 536 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 SLC37A2Q8TED4 501 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 CHP1Q99653 195 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 OCIAD1Q9NX40 245 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 UVRAGQ9P2Y5 699 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 TBC1D29Q9UFV1 150 aa17.88■□□□□ 0.45
ATG4B-221ENST00000483778 ASH1LQ9NR48 2969 aaKnown RBP17.87■□□□□ 0.45
ATG4B-221ENST00000483778 C1orf232A0A0U1RR37 186 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 ANKRD66B4E2M5 251 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 B8ZZF3 427 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 GOLGA6L19H0YKK7 550 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 H2AFZP0C0S5 128 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 PIRTP0C851 137 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 CES1P23141 567 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 SLC18A3Q16572 532 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 HENMT1Q5T8I9 393 aaKnown RBP17.87■□□□□ 0.45
ATG4B-221ENST00000483778 H2AFVQ71UI9 128 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 CHST15Q7LFX5 561 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-221ENST00000483778 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms