RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ABTB1Q969K4 478 aaPredicted RBP4.06□□□□□ -1.76
COMMD3-213ENST00000483684 UHRF2Q96PU4 802 aa4.06□□□□□ -1.76
COMMD3-213ENST00000483684 SEC62Q99442 399 aaKnown RBP4.06□□□□□ -1.76
COMMD3-213ENST00000483684 PCYT2Q99447 389 aa4.06□□□□□ -1.76
COMMD3-213ENST00000483684 MTERF1Q99551 399 aaKnown RBP4.06□□□□□ -1.76
COMMD3-213ENST00000483684 GAB2Q9UQC2 676 aa4.06□□□□□ -1.76
COMMD3-213ENST00000483684 AMDHD2Q9Y303 409 aa4.06□□□□□ -1.76
COMMD3-213ENST00000483684 ZNF711Q9Y462 761 aa4.06□□□□□ -1.76
COMMD3-213ENST00000483684 LOXL2Q9Y4K0 774 aa4.06□□□□□ -1.76
COMMD3-213ENST00000483684 EIF3CLB5ME19 914 aaKnown RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 EGFP01133 1207 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 MYOD1P15172 320 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 CORO1AP31146 461 aaKnown RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 CLCN3P51790 818 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 RARSP54136 660 aaKnown RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 CASP6P55212 293 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 CXorf66Q5JRM2 361 aaPredicted RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 SIGIRRQ6IA17 410 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 ZNF280DQ6N043 979 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 TSSK4Q6SA08 328 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 ATF7IPQ6VMQ6 1270 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 PCDH20Q8N6Y1 951 aaKnown RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 IL17REQ8NFR9 667 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 HMGCLL1Q8TB92 370 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 ORAI1Q96D31 301 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 GRAMD2BQ96HH9 432 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 PPP1R13BQ96KQ4 1090 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 EPYCQ99645 322 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 MAF1Q9H063 256 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 MMP28Q9H239 520 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 JMJD4Q9H9V9 463 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 SLC28A3Q9HAS3 691 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 SEBOXQ9HB31 216 aaPredicted RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 TMEM30AQ9NV96 361 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 PGAP2Q9UHJ9 254 aa4.05□□□□□ -1.76
COMMD3-213ENST00000483684 RALYQ9UKM9 306 aaKnown RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 TP53BP1Q12888 1972 aaPredicted RBP4.05□□□□□ -1.76
COMMD3-213ENST00000483684 FAM237AA0A1B0GTK4 181 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 A0A1W2PPH5 198 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 NPIPB15A6NHN6 443 aaPredicted RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 SEC14L2O76054 403 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 NKX2-2O95096 273 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 GNL1P36915 607 aaPredicted RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 IL15P40933 162 aaPredicted RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 CSNK2A1P68400 391 aaPredicted RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 PDE1BQ01064 536 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 FOXM1Q08050 763 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 OLIG2Q13516 323 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 RBBP5Q15291 538 aaKnown RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 SYT16Q17RD7 645 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 GDPD4Q6W3E5 623 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 RNF113BQ8IZP6 322 aaKnown RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 BEST3Q8N1M1 668 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 CSNK2A3Q8NEV1 391 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 DBF4BQ8NFT6 615 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 IGSF8Q969P0 613 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 RHBDF1Q96CC6 855 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 CDCA5Q96FF9 252 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 PCGF1Q9BSM1 259 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 GFRA4Q9GZZ7 299 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 UBA5Q9GZZ9 404 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 PLEKHA5Q9HAU0 1116 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 SCPEP1Q9HB40 452 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 KLHL1Q9NR64 748 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 ACSS1Q9NUB1 689 aaPredicted RBP4.04□□□□□ -1.76
COMMD3-213ENST00000483684 ABI3Q9P2A4 366 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
COMMD3-213ENST00000483684 C16orf97H3BN30 126 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 CRYAAP02489 173 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 CETPP11597 493 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 ZNF182P17025 639 aaPredicted RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 USP8P40818 1118 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 RGS2P41220 211 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 ISL1P61371 349 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 RPL7AP62424 266 aaKnown RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 OLR1P78380 273 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 TMEM115Q12893 351 aaPredicted RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 G3BP1Q13283 466 aaKnown RBP eCLIP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 DCTN2Q13561 401 aaKnown RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 FRG1Q14331 258 aaKnown RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 CCDC96Q2M329 555 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 ALFQ53S48 1182 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 INTS11Q5TA45 600 aaKnown RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 FRG2Q64ET8 278 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 TRNP1Q6NT89 227 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 MMS22LQ6ZRQ5 1243 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 DPPA4Q7L190 304 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 GSTA5Q7RTV2 222 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 DSG4Q86SJ6 1040 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 KMT5CQ86Y97 462 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 CIARTQ8N365 385 aaPredicted RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 OR14L1PQ8NHC6 308 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 KCNG4Q8TDN1 519 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 INTS12Q96CB8 462 aaKnown RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 MMABQ96EY8 250 aaPredicted RBP4.03□□□□□ -1.76
COMMD3-213ENST00000483684 ACOX2Q99424 681 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 STRA6Q9BX79 667 aa4.03□□□□□ -1.76
COMMD3-213ENST00000483684 PADI3Q9ULW8 664 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms