RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 POLD2P49005 469 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 DAB2P98082 770 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 CCNG2Q16589 344 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 PARP6Q2NL67 630 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 P3H1Q32P28 736 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 RANBP10Q6VN20 620 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 NLRP8Q86W28 1048 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 FSTL5Q8N475 847 aaPredicted RBP13.32□□□□□ -0.28
SSR1-208ENST00000483409 TTC30BQ8N4P2 665 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 GPR26Q8NDV2 337 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 PTCD2Q8WV60 388 aaKnown RBP13.32□□□□□ -0.28
SSR1-208ENST00000483409 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 RTP4Q96DX8 246 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 MS4A14Q96JA4 679 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 HIC2Q96JB3 615 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 TBATAQ96M53 351 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 DUSP23Q9BVJ7 150 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 FRMD8Q9BZ67 464 aaPredicted RBP13.32□□□□□ -0.28
SSR1-208ENST00000483409 TMEM168Q9H0V1 697 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 TRABDQ9H4I3 376 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 CARS2Q9HA77 564 aaKnown RBP13.32□□□□□ -0.28
SSR1-208ENST00000483409 HACD3Q9P035 362 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 DOLKQ9UPQ8 538 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 TMEM98Q9Y2Y6 226 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 RP1P56715 2156 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 ASXL3Q9C0F0 2248 aa13.32□□□□□ -0.28
SSR1-208ENST00000483409 LMO7DNF2Z398 122 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 YY2O15391 372 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
SSR1-208ENST00000483409 FUCA1P04066 466 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 ANXA6P08133 673 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 SPINK2P20155 84 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 MSNP26038 577 aaKnown RBP13.31□□□□□ -0.28
SSR1-208ENST00000483409 ACTN2P35609 894 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 GNPDA1P46926 289 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 ACADVLP49748 655 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 DCDC1P59894 354 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 FOXK2Q01167 660 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 ELOCQ15369 112 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 KCTD11Q693B1 232 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 MARK2Q7KZI7 788 aaKnown RBP13.31□□□□□ -0.28
SSR1-208ENST00000483409 KLHDC8BQ8IXV7 354 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
SSR1-208ENST00000483409 CCDC89Q8N998 374 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 GLIS1Q8NBF1 620 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 LRRC45Q96CN5 670 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 COX14Q96I36 57 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 PBKQ96KB5 322 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 APOLD1Q96LR9 279 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 RAD18Q9NS91 495 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 SMARCAL1Q9NZC9 954 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 CNOT6Q9ULM6 557 aaKnown RBP13.31□□□□□ -0.28
SSR1-208ENST00000483409 SUFUQ9UMX1 484 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 SLC17A4Q9Y2C5 497 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 ARL5AQ9Y689 179 aa13.31□□□□□ -0.28
SSR1-208ENST00000483409 OAS3Q9Y6K5 1087 aaKnown RBP13.31□□□□□ -0.28
SSR1-208ENST00000483409 TPP1O14773 563 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 ASMTLO95671 621 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 AP2A1O95782 977 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 ZSCAN5DPP0CG00 497 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 CKMT2P17540 419 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 HMGCLP35914 325 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 KCNJ1P48048 391 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 PTPRCAPQ14761 206 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 KCTD19Q17RG1 926 aaPredicted RBP13.3□□□□□ -0.28
SSR1-208ENST00000483409 DENND5AQ6IQ26 1287 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
SSR1-208ENST00000483409 TAF8Q7Z7C8 310 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 GKN2Q86XP6 184 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 CHCHD4Q8N4Q1 142 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 TRAM1L1Q8N609 369 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 PRELID2Q8N945 189 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 CCL4L1Q8NHW4 92 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 OSBPL9Q96SU4 736 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 ZSCAN5AQ9BUG6 496 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 CDH19Q9H159 772 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 LRRC40Q9H9A6 602 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 ETNK1Q9HBU6 452 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 PIH1D1Q9NWS0 290 aaKnown RBP13.3□□□□□ -0.28
SSR1-208ENST00000483409 IL17CQ9P0M4 197 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 SIRPGQ9P1W8 387 aa13.3□□□□□ -0.28
SSR1-208ENST00000483409 NFKBIL1Q9UBC1 381 aaPredicted RBP13.3□□□□□ -0.28
SSR1-208ENST00000483409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.3□□□□□ -0.283e-11■■□□□ 11.5
SSR1-208ENST00000483409 LY6G6EA0A0G2JKS1 128 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 RFPL3O75679 317 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 TRIM16O95361 564 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 IVLP07476 585 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 SPAM1P38567 509 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 TAF1AQ15573 450 aaPredicted RBP13.29□□□□□ -0.28
SSR1-208ENST00000483409 C6orf132Q5T0Z8 1188 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 ZNF648Q5T619 568 aaPredicted RBP13.29□□□□□ -0.28
SSR1-208ENST00000483409 DRICH1Q6PGQ1 229 aaPredicted RBP13.29□□□□□ -0.28
SSR1-208ENST00000483409 DHRS13Q6UX07 377 aa13.29□□□□□ -0.28
SSR1-208ENST00000483409 FAM151BQ6UXP7 276 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms