RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SMIM10L2BP0DMW5 78 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 HK2P52789 917 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 VAC14Q08AM6 782 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SIM2Q14190 667 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 BROXQ5VW32 411 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 PSMG2Q969U7 264 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 TAMM41Q96BW9 452 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 NPLQ9BXD5 320 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 GALPQ9UBC7 116 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 IMPDH1P20839 514 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PCSK1P29120 753 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PRDX3P30048 256 aaKnown RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 MTHFRP42898 656 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 CD300CQ08708 224 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PPIL2Q13356 520 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SNX17Q15036 470 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 ACAP2Q15057 778 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 DCLRE1AQ6PJP8 1040 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 C14orf80Q86SX3 495 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 TMEM126BQ8IUX1 230 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 MICU2Q8IYU8 434 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 TMEM151AQ8N4L1 468 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 HMGCLL1Q8TB92 370 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 HTRA1Q92743 480 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PTERQ96BW5 349 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SLC10A4Q96EP9 437 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 RANBP9Q96S59 729 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 AGO3Q9H9G7 860 aaKnown RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 ZNF112Q9UJU3 913 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 TCRBV3S1A0A5B6 114 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 NPEPPSL1A6NEC2 478 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 ZNF487B1APH4 448 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SLC22A3O75751 556 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 ZNF682O95780 498 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 GSNP06396 782 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SLC2A4P14672 509 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 JAK1P23458 1154 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SLC6A2P23975 617 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 ARNTP27540 789 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 MAGEA12P43365 314 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SEPHS1P49903 392 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 TUBA4AP68366 448 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 CLCQ05315 142 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 SFSWAPQ12872 951 aaKnown RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 ZNF829Q3KNS6 432 aaPredicted RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 UNC50Q53HI1 259 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 ZNF678Q5SXM1 525 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 KIAA0319Q5VV43 1072 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PAQR3Q6TCH7 311 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 LYSMD3Q7Z3D4 306 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 EPHX4Q8IUS5 362 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 OSCP1Q8WVF1 389 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 GPR78Q96P69 363 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 C11orf84Q9BUA3 381 aaPredicted RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 MROH8Q9H579 483 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 SACM1LQ9NTJ5 587 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 TMEM181Q9P2C4 612 aa12.66□□□□□ -0.38
VPS52-218ENST00000482399 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
VPS52-218ENST00000482399 FUOMA2VDF0 154 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 C16orf96A6NNT2 1141 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 PIRO00625 290 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 TBX18O95935 607 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CST1P01037 141 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 FCGR1AP12314 374 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 MATN1P21941 496 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 ALDH3B2P48448 385 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 RENBPP51606 427 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 RELAQ04206 551 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 PTPRNQ16849 979 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 FAM98BQ52LJ0 330 aaKnown RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 PAGE3Q5JUK9 113 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 RAP1GAP2Q684P5 730 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 GCNT7Q6ZNI0 430 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 R3HCC1LQ7Z5L2 792 aaKnown RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 SLCO6A1Q86UG4 719 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 HEATR4Q86WZ0 1026 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 CFAP52Q8N1V2 620 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 C2CD4AQ8NCU7 369 aaPredicted RBP12.65□□□□□ -0.38
VPS52-218ENST00000482399 GIPC2Q8TF65 315 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 MRGPRX2Q96LB1 330 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 C16orf70Q9BSU1 422 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 RIBC2Q9H4K1 309 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 GSTO2Q9H4Y5 243 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 ABCB10Q9NRK6 738 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 MAP10Q9P2G4 905 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 POLG2Q9UHN1 485 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 VPS28Q9UK41 221 aa12.65□□□□□ -0.38
VPS52-218ENST00000482399 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms