RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CCNL2Q96S94 520 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 MLPHQ9BV36 600 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 RIOK2Q9BVS4 552 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 SEPT10Q9P0V9 454 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 TMEM98Q9Y2Y6 226 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 C3orf70A6NLC5 250 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 PRLP01236 227 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 JCHAINP01591 159 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 HLA-DQB2P05538 268 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 GPR3P46089 330 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 STC1P52823 247 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 OR1D5P58170 312 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 CFHR1Q03591 330 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 CLN3Q13286 438 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 PYCR3Q53H96 274 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 ODF2Q5BJF6 829 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 TMEM164Q5U3C3 297 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 USP53Q70EK8 1073 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 TMPRSS9Q7Z410 1059 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNF438Q7Z4V0 828 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 GALNT13Q8IUC8 556 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 SLITRK4Q8IW52 837 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 RHOT2Q8IXI1 618 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 NAGSQ8N159 534 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 CCHCR1Q8TD31 782 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 CCDC42Q96M95 316 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 LYSMD1Q96S90 227 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 AGAP2Q99490 1192 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 RDH14Q9HBH5 336 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 DTLQ9NZJ0 730 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 PKD2L2Q9NZM6 624 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 ACSL6Q9UKU0 697 aa13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 PCYT1BQ9Y5K3 369 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-208ENST00000482272 C1orf232A0A0U1RR37 186 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 LRRD1A4D1F6 860 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 RGSL1A5PLK6 1076 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNF487B1APH4 448 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ANKRD66B4E2M5 251 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 AGRPO00253 132 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 INPP4BO15327 924 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 LIPCP11150 499 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ZFXP17010 805 aaPredicted RBP13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ITIH1P19827 911 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 CD86P42081 329 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 MAPK10P53779 464 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 LRP8Q14114 963 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 NR1D2Q14995 579 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 MARK2Q7KZI7 788 aaKnown RBP13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 VSIG1Q86XK7 387 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 VSTM4Q8IW00 320 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 USP7Q93009 1102 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 COX14Q96I36 57 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 DPYSL5Q9BPU6 564 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 B3GNT4Q9C0J1 378 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 SEMA6CQ9H3T2 930 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 FAM83DQ9H4H8 585 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNHIT2Q9UHR6 403 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 PLEKHM1Q9Y4G2 1056 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 PCDHB11Q9Y5F2 797 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 HEY1Q9Y5J3 304 aa13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 SETXQ7Z333 2677 aaKnown RBP13.36□□□□□ -0.27
CTDSP1-208ENST00000482272 KCNK1O00180 336 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 APOL1O14791 398 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 HGSO14964 777 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 PPM1DO15297 605 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 C1QL1O75973 258 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 MMP2P08253 660 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 CD82P27701 267 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 CD1CP29017 333 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 SPINT3P49223 89 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 IFI35P80217 286 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 AP1B1Q10567 949 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 TRA2AQ13595 282 aaKnown RBP eCLIP13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 PDK1Q15118 436 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 B4GALNT4Q76KP1 1039 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 PLD5Q8N7P1 536 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 CNTD1Q8N815 330 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 RNF214Q8ND24 703 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 PATE1Q8WXA2 126 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 WDR24Q96S15 920 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 BRD8Q9H0E9 1235 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 RMI1Q9H9A7 625 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 NHEJ1Q9H9Q4 299 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 KCNK4Q9NYG8 393 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 VPS18Q9P253 973 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 HYOU1Q9Y4L1 999 aa13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 ARHGEF17Q96PE2 2063 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-208ENST00000482272 UNC13CQ8NB66 2214 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 TRBV23OR9-2A0A075B6M9 112 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 PRAMEF33A0A0G2JMD5 474 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms