RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 EIF2S1P05198 315 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 ZFYP08048 801 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 UROSP10746 265 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 TPH1P17752 444 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 CYP2A7P20853 494 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 GATA3P23771 443 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 PTPN6P29350 595 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 BMI1P35226 326 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 RFC2P35250 354 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 LONP1P36776 959 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 CCT6AP40227 531 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 PTDSS1P48651 473 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 LIG4P49917 911 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 MRPL12P52815 198 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 NXPH1P58417 271 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 KIAA1024LP59773 190 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 CSNK2BP67870 215 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ASIC1P78348 528 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 NUCB2P80303 420 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ABATP80404 500 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 CEBPZQ03701 1054 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 GFPT1Q06210 699 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 ABHD18Q0P651 414 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 GRSF1Q12849 480 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS41-212ENST00000482217 TP53BP2Q13625 1128 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ALCAMQ13740 583 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 IDI1Q13907 227 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 DPYSQ14117 519 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 DHX34Q14147 1143 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 IL11RAQ14626 422 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 LETM2Q2VYF4 491 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ZNF750Q32MQ0 723 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ZIK1Q3SY52 487 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 TDRD12Q587J7 1177 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 HSP90AA4PQ58FG1 418 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 FSCBQ5H9T9 825 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 SH2D4BQ5SQS7 431 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 LY6G5CQ5SRR4 150 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ARHGAP40Q5TG30 622 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 PDPK2PQ6A1A2 396 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ANKRD40Q6AI12 368 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 KIAA0930Q6ICG6 404 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 OR7E24Q6IFN5 339 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 NEK5Q6P3R8 708 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 FAM173BQ6P4H8 233 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 RBPMS2Q6ZRY4 209 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 MIER3Q7Z3K6 550 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 SPATA19Q7Z5L4 167 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 TADA2BQ86TJ2 420 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 LUZP1Q86V48 1076 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 NKAIN4Q8IVV8 208 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 DHX40Q8IX18 779 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 SLC15A3Q8IY34 581 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 PI4KAP1Q8N8J0 262 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 EIF1ADQ8N9N8 165 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 ATAD1Q8NBU5 361 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 RBM15BQ8NDT2 890 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 OR8K5Q8NH50 307 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 PPP2R3CQ969Q6 453 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 TMCO6Q96DC7 493 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 C19orf60Q96EN9 201 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 PTCD3Q96EY7 689 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 C11orf24Q96F05 449 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 RBM17Q96I25 401 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 SEMA3CQ99985 751 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 MGME1Q9BQP7 344 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 OSBPL10Q9BXB5 764 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 AMBRA1Q9C0C7 1298 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 RHBGQ9H310 441 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 VCX3BQ9H321 246 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 CXorf36Q9H7Y0 433 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 FBRSL1Q9HCM7 1045 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 FSCN3Q9NQT6 498 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 TMEM184CQ9NVA4 438 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 ARHGEF38Q9NXL2 777 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 WSB2Q9NYS7 404 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 ARMCX3Q9UH62 379 aaPredicted RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 ITGA11Q9UKX5 1188 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 STK38LQ9Y2H1 464 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 GMEB1Q9Y692 573 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 COMMD3-BMI1R4GMX3 469 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 CCDC187A0A096LP49 1063 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 A0A0A6YYC8 382 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 LOC100653049A0A140TA62 436 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 C5orf51A6NDU8 294 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 FAM47DPA6NHR8 397 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 UNC119BA6NIH7 251 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 RSPH10B2B2RC85 870 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 I3L1I5 382 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 NDUFS8O00217 210 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 GRM8O00222 908 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 TSPAN4O14817 238 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 LDLRAD4O15165 306 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 BCAT2O15382 392 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 RRP8O43159 456 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 CIDEAO60543 219 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 LPXNO60711 386 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 NME6O75414 186 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 KRT34O76011 436 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 NTSR2O95665 410 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms