RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 VAPBO95292 243 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SOD1P00441 154 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 C1QAP02745 245 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SP9P0CG40 484 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 ITGALP20701 1170 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 OGNP20774 298 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 BCKDHBP21953 392 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 HNRNPA2B1P22626 353 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SSTR1P30872 391 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 MC4RP32245 332 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CACNG1Q06432 222 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SGCGQ13326 291 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 NFATC2Q13469 925 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 LRRC14Q15048 493 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 KYNUQ16719 465 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 WSCD2Q2TBF2 565 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 GPR33Q49SQ1 333 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 PMS2CLQ68D20 193 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CES3Q6UWW8 571 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 RFLNAQ6ZTI6 216 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SNX20Q7Z614 316 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 GALNT7Q86SF2 657 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 KCNMB4Q86W47 210 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 TMEM145Q8NBT3 493 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 GPR150Q8NGU9 434 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 OR4L1Q8NH43 312 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 GABPB2Q8TAK5 448 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CALML6Q8TD86 181 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 ULK4Q96C45 1275 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 AP2M1Q96CW1 435 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 ORAI3Q9BRQ5 295 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM167BQ9BTA0 163 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 ACSS3Q9H6R3 686 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CD84Q9UIB8 345 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 TP53BP1Q12888 1972 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 UQCRHLA0A096LP55 91 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 A0A1W2PPC4 97 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM159BA6NKW6 160 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 CCL22O00626 93 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 TOR1BO14657 336 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 UQCRHP07919 91 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 IGFALSP35858 605 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 TRIM23P36406 574 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 TMPRSS15P98073 1019 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 MGAT5Q09328 741 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 NAB1Q13506 487 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 IRF4Q15306 451 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 TYSND1Q2T9J0 566 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 AARS2Q5JTZ9 985 aaKnown RBP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 TRMT10BQ6PF06 316 aaKnown RBP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM151BQ6UXP7 276 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 ADAMTSL4Q6UY14 1074 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 SLC41A1Q8IVJ1 513 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 SPATA16Q9BXB7 569 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 SUDS3Q9H7L9 328 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 VPS37BQ9H9H4 285 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 EBF2Q9HAK2 575 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 CATSPERZQ9NTU4 200 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 C20orf96Q9NUD7 363 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 ARGLU1Q9NWB6 273 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 LRP4O75096 1905 aa12.47□□□□□ -0.41
TRAPPC12-218ENST00000479897 CACNA1HO95180 2353 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 OR51F1A6NGY5 319 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 FADS2P1A8MWK0 482 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 PRAMEF26H0Y7S4 382 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 RAD51BO15315 384 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 FSBPO95073 299 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 ACSL3O95573 720 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 PAK4O96013 591 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 HOXC4P09017 264 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 CD27P26842 260 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 MAT2AP31153 395 aaKnown RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 AKT2P31751 481 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 CHRNA6Q15825 494 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 UAP1Q16222 522 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 ATP13A5Q4VNC0 1218 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 FASTKD1Q53R41 847 aaKnown RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 BEND6Q5SZJ8 279 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 UBAP2Q5T6F2 1119 aaKnown RBP12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 ALS2CLQ60I27 953 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 RAET1GQ6H3X3 334 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 MRNIPQ6NTE8 343 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 PSAPL1Q6NUJ1 521 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 NEPROQ6NW34 567 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
TRAPPC12-218ENST00000479897 KYAT3Q6YP21 454 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms