RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GPATCH2Q9NW75 528 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SPATA6Q9NWH7 488 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 VPS18Q9P253 973 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF212Q9UDV6 495 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 IPO11Q9UI26 975 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ADAMTS6Q9UKP5 1117 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 INTS6Q9UL03 887 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MMP17Q9ULZ9 603 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 HS3ST2Q9Y278 367 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MTF2Q9Y483 593 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 OR51B4Q9Y5P0 310 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 STON1Q9Y6Q2 735 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SHROOM3Q8TF72 1996 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 NYNRINQ9P2P1 1898 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 GOLGA6L10A0A0M3HER8 536 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 TARSL2A2RTX5 802 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 GOLGA6L10A6NI86 522 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SHISA7A6NL88 538 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 C1QTNF3-AMACRE9PGA6 284 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 H3BQF6 201 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 H7C0C1 242 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CES2O00748 559 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 OPA1O60313 960 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SNAP91O60641 907 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PRAMEF11O60813 436 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RASSF9O75901 435 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 KIAA0754O94854 1291 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 IGSF6O95976 241 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PDGFBP01127 241 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SCG5P05408 212 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ACADMP11310 421 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 MYCLP1P12525 358 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SRCP12931 536 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 HSPA9P38646 679 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PEX19P40855 299 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 IL12RB1P42701 662 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 WASP42768 502 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PAFAH1B1P43034 410 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ATP5OP48047 213 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CXCL12P48061 93 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 NUMBP49757 651 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RHOAP61586 193 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ARF5P84085 180 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ROR2Q01974 943 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 GBE1Q04446 702 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CYP4F3Q08477 520 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CCDC15Q0P6D6 951 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 GALNT2Q10471 571 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 XRCC4Q13426 336 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 GRM3Q14832 879 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 LLGL1Q15334 1064 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 DLG2Q15700 870 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 NKPD1Q17RQ9 610 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 MARC1Q5VT66 337 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 TMEM215Q68D42 235 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 C22orf39Q6P5X5 142 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 DARS2Q6PI48 645 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RINLQ6ZS11 566 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 Q6ZS52 159 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SYT13Q7L8C5 426 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CDKL3Q8IVW4 592 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ARHGAP12Q8IWW6 846 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CCDC13Q8IYE1 715 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RYBPQ8N488 228 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CCDC33Q8N5R6 958 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CAMKK1Q8N5S9 505 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 NPWQ8N729 165 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PQLC3Q8N755 202 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PAF1Q8N7H5 531 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 IL17RCQ8NAC3 791 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 TSTD1Q8NFU3 115 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 OR52K2Q8NGK3 314 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SORCS1Q8WY21 1168 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 OR8D1Q8WZ84 308 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ALG3Q92685 438 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RELTQ969Z4 430 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ISG20Q96AZ6 181 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 LRRC45Q96CN5 670 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 P2RY11Q96G91 374 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 TCTN2Q96GX1 697 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 C1orf159Q96HA4 380 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RPL10LQ96L21 214 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 RMDN2Q96LZ7 410 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 TSGA13Q96PP4 275 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PSMB7Q99436 277 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 PRRX2Q99811 253 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 GABRG3Q99928 467 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 IQCGQ9H095 443 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 TRIT1Q9H3H1 467 aaKnown RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 DYRK4Q9NR20 520 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ETNK2Q9NVF9 386 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 DTLQ9NZJ0 730 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 NDOR1Q9UHB4 597 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 AMACRQ9UHK6 382 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 CORO1CQ9ULV4 474 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SNX12Q9UMY4 172 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 ST14Q9Y5Y6 855 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 SAR1BQ9Y6B6 198 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 FAM169AQ9Y6X4 670 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms