RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PNPLA1Q8N8W4 532 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 TFAP2CQ92754 450 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 RMND5BQ96G75 393 aaPredicted RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 PDFQ9HBH1 243 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 OLAHQ9NV23 265 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 NLE1Q9NVX2 485 aaPredicted RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 TAS2R13Q9NYV9 303 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC8A2Q9UPR5 921 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 CEPT1Q9Y6K0 416 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 DHRS12A0PJE2 317 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 TTC24A2A3L6 582 aaPredicted RBP24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 STX16O14662 325 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 AKAP10O43572 662 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 SIX3O95343 332 aaPredicted RBP24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 FCGR1AP12314 374 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 PSMA4P25789 261 aaKnown RBP24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 OR1E1P30953 314 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 CLCQ05315 142 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 RPS6KA2Q15349 733 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 KCTD21Q4G0X4 260 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 SPNS2Q8IVW8 549 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 DDIASQ8IXT1 998 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 TRIML2Q8N7C3 387 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 EXT2Q93063 718 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 FBXO32Q969P5 355 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 TRIB3Q96RU7 358 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC39A3Q9BRY0 314 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 DUS2Q9NX74 493 aaKnown RBP24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 PTBP2Q9UKA9 531 aaKnown RBP24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 VPS9D1Q9Y2B5 631 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 AK5Q9Y6K8 562 aa24.53■■□□□ 1.52
SYNGAP1-206ENST00000479510 H3BMM5 538 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 TIPRLO75663 272 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 GPIP06744 558 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 PRR35P0CG20 571 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 CDH2P19022 906 aaPredicted RBP24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 GPR15P49685 360 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 RAD51Q06609 339 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 CACNB2Q08289 660 aaPredicted RBP24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 CYTH1Q15438 398 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 ANKS6Q68DC2 871 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 AFTPHQ6ULP2 937 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 FBXO39Q8N4B4 442 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 SNX31Q8N9S9 440 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 TUBGCP3Q96CW5 907 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 LRRC58Q96CX6 371 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 CDKN2AIPNLQ96HQ2 116 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 CLK4Q9HAZ1 481 aaKnown RBP24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC52A3Q9NQ40 469 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 AGPAT4Q9NRZ5 378 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 POLG2Q9UHN1 485 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 TANC1Q9C0D5 1861 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 BMP10O95393 424 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 RPS17P08708 135 aaKnown RBP24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 HGFP14210 728 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC6A2P23975 617 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 GRB7Q14451 532 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 C5orf22Q49AR2 442 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 VPS26BQ4G0F5 336 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 TBCELQ5QJ74 424 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 TXNDC11Q6PKC3 985 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 COLGALT2Q8IYK4 626 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 TUBB1Q9H4B7 451 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 RNF112Q9ULX5 631 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 GPR45Q9Y5Y3 372 aa24.52■■□□□ 1.52
SYNGAP1-206ENST00000479510 KLK8O60259 260 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 RHOBTB1O94844 696 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 CD9P21926 228 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 FGFR3P22607 806 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 ZNF140P52738 457 aaPredicted RBP24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 C10orf120Q5SQS8 335 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 MYO1HQ8N1T3 1032 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 OR13C4Q8NGS5 318 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 MGME1Q9BQP7 344 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 C9orf16Q9BUW7 83 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 ANKRD36A6QL64 1941 aa24.51■■□□□ 1.51
SYNGAP1-206ENST00000479510 A0A1W2PP18 115 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 KANSL1LA0AUZ9 987 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 OR6C75A6NL08 312 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 MUSKO15146 869 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 ADAMTS4O75173 837 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 FASP25445 335 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 GRK4P32298 578 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 ACVRL1P37023 503 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 FOXA1P55317 472 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 NME5P56597 212 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 ZNF280BQ86YH2 543 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 NKAPQ8N5F7 415 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 TNIP2Q8NFZ5 429 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 MYRFLQ96LU7 910 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 MAGEH1Q9H213 219 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 CCDC68Q9H2F9 335 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 CMTM6Q9NX76 183 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 RSL24D1Q9UHA3 163 aaKnown RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 ARIH1Q9Y4X5 557 aaPredicted RBP24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 PCDHA9Q9Y5H5 950 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 MYOCOSA0A1B0GUC4 107 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 SLC12A8A0AV02 714 aa24.5■■□□□ 1.51
SYNGAP1-206ENST00000479510 TRIM64CA6NLI5 447 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms