RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
ABCF3-212ENST00000478288 PRICKLE2Q7Z3G6 844 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 SFRP1Q8N474 314 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 PATE1Q8WXA2 126 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 TEFMQ96QE5 360 aaKnown RBP12.92□□□□□ -0.34
ABCF3-212ENST00000478288 ABCG8Q9H221 673 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 ADNPQ9H2P0 1102 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 NT5MQ9NPB1 228 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 GOLGA6AQ9NYA3 693 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 KCNK4Q9NYG8 393 aa12.92□□□□□ -0.34
ABCF3-212ENST00000478288 RPL26L1Q9UNX3 145 aaKnown RBP12.92□□□□□ -0.34
ABCF3-212ENST00000478288 SPENQ96T58 3664 aaKnown RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 A0A1W2PQJ5 194 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 PDHA1P08559 390 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 FAM87AP0C7U9 286 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 WT1P19544 449 aaPredicted RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 POLD2P49005 469 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 NR1I3Q14994 352 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 PAFAH1B3Q15102 231 aaKnown RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 HGSNATQ68CP4 663 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 TXNRD3NBQ6F5E7 133 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 TMEM71Q6P5X7 295 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 WDR74Q6RFH5 385 aaPredicted RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 GALNT13Q8IUC8 556 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 HTR3CQ8WXA8 447 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 NKD1Q969G9 470 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 COL26A1Q96A83 441 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 TSGA13Q96PP4 275 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 ZNF670Q9BS34 389 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 FUCA2Q9BTY2 467 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 SLC12A9Q9BXP2 914 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 RMI1Q9H9A7 625 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
ABCF3-212ENST00000478288 ANAPC7Q9UJX3 599 aa12.91□□□□□ -0.34
ABCF3-212ENST00000478288 SPTBN1Q01082 2364 aaKnown RBP12.9□□□□□ -0.34
ABCF3-212ENST00000478288 RGSL1A5PLK6 1076 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 MATN3O15232 486 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 CAPN5O15484 640 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-212ENST00000478288 SUV39H1O43463 412 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 DUX1O43812 170 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 MFSD11O43934 449 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 PPFIA2O75334 1257 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 CYP1A2P05177 515 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 SKILP12757 684 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 CTPS1P17812 591 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 UGT1A3P35503 534 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 ZNF165P49910 485 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 ARSEP51690 589 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 EPHB1P54762 984 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 KRT81Q14533 505 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 DOK6Q6PKX4 331 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 ATG14Q6ZNE5 492 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 BMPERQ8N8U9 685 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 AVL9Q8NBF6 648 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 OR10G6Q8NH81 332 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 SLC37A2Q8TED4 501 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 SCAMP4Q969E2 229 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 NAP1L5Q96NT1 182 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-212ENST00000478288 NUP85Q9BW27 656 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 THAP2Q9H0W7 228 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 SLC25A18Q9H1K4 315 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 EPB41L1Q9H4G0 881 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 SARS2Q9NP81 518 aaKnown RBP12.9□□□□□ -0.34
ABCF3-212ENST00000478288 TUBD1Q9UJT1 453 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 B3GALT1Q9Y5Z6 326 aa12.9□□□□□ -0.34
ABCF3-212ENST00000478288 USP9YO00507 2555 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 MYO1FO00160 1098 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 DNAJC6O75061 913 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 SERPING1P05155 500 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 SLC2A4P14672 509 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 MX2P20592 715 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 CCNCP24863 283 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 MAN1A1P33908 653 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 EPHA4P54764 986 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 PTPRRQ15256 657 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 IFI16Q16666 785 aaKnown RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 HADHQ16836 314 aaKnown RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 TDRD12Q587J7 1177 aaKnown RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 CCDC122Q5T0U0 273 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 DCAF12Q5T6F0 453 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 HENMT1Q5T8I9 393 aaKnown RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 NKAIN2Q5VXU1 208 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 NCBP2-AS2Q69YL0 99 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 BORAQ6PGQ7 559 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 RFLNAQ6ZTI6 216 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 ART4Q93070 314 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 PMEPA1Q969W9 287 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 SH3KBP1Q96B97 665 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 FAF2Q96CS3 445 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms