RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SEPHS1P49903 392 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 CUL4AQ13619 759 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 RAPSNQ13702 412 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 GRM3Q14832 879 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 SLC25A52Q3SY17 297 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 PYCR3Q53H96 274 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 VWA5B1Q5TIE3 1220 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 PWWP2BQ6NUJ5 590 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 BNC2Q6ZN30 1099 aaPredicted RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 Q6ZS92 163 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 MED25Q71SY5 747 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 DPPA4Q7L190 304 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 CDH24Q86UP0 819 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 CUZD1Q86UP6 607 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 ARFGAP1Q8N6T3 406 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM102Q8N9M5 508 aaPredicted RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 KLHL6Q8WZ60 621 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 ECHDC3Q96DC8 303 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 EXOC2Q96KP1 924 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 FCRL4Q96PJ5 515 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 TBC1D10AQ9BXI6 508 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 KLC2Q9H0B6 622 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 ILKAPQ9H0C8 392 aaPredicted RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 NOL6Q9H6R4 1146 aaKnown RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM248Q9NWD8 314 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 OGFRQ9NZT2 677 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 OR12D3Q9UGF7 316 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 STAP1Q9ULZ2 295 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 NEU3Q9UQ49 428 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 PKDREJQ9NTG1 2253 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 A8MX80 341 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 PPP1R3GB7ZBB8 358 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM72CH0Y354 149 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 ATMINO43313 823 aaPredicted RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 THAP12O43422 761 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 KIF1CO43896 1103 aaKnown RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 KRT5P13647 590 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 EDN3P14138 238 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 CD99P14209 185 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 TEAD1P28347 426 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 CA5AP35218 305 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 SULT1E1P49888 294 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 NRG1Q02297 640 aaPredicted RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 PTK2Q05397 1052 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 LRP8Q14114 963 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 ACOX1Q15067 660 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 ANO6Q4KMQ2 910 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM72AQ5TYM5 149 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 LYPLAL1Q5VWZ2 237 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 IZUMO3Q5VZ72 239 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM72DQ6L9T8 149 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM72BQ86X60 149 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 DNAAF5Q86Y56 855 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 NXPE1Q8N323 547 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 ZBTB2Q8N680 514 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 NUS1Q96E22 293 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 OR2M4Q96R27 311 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 TUBGCP5Q96RT8 1024 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 NCAPGQ9BPX3 1015 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 MAGEB5Q9BZ81 275 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 GTPBP4Q9BZE4 634 aaKnown RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 UPF2Q9HAU5 1272 aaKnown RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 TBC1D29Q9UFV1 150 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 ARMCX3Q9UH62 379 aaPredicted RBP7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM98Q9Y2Y6 226 aa7.25□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM221AA4D161 298 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 TRAFD1O14545 582 aaPredicted RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 LRIG2O94898 1065 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 SOD1P00441 154 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 NELFEP18615 380 aaKnown RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 GNA15P30679 374 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 VAV2P52735 878 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 PRSS12P56730 875 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 FKBP3Q00688 224 aaKnown RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 LLGL1Q15334 1064 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 PTPN20Q4JDL3 420 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 VWA2Q5GFL6 755 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 CFAP58Q5T655 872 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM69BQ5VUD6 431 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 TRNP1Q6NT89 227 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 RWDD4Q6NW29 188 aaKnown RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 DOK6Q6PKX4 331 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 PRSS42Q7Z5A4 293 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 SLC9B2Q86UD5 537 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 BPHLQ86WA6 291 aaPredicted RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 FAM131BQ86XD5 332 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 ZDHHC17Q8IUH5 632 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 C1orf131Q8NDD1 294 aaKnown RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 EHBP1Q8NDI1 1231 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 GRHL3Q8TE85 626 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 FAR1Q8WVX9 515 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 C14orf79Q96F83 325 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 DTD2Q96FN9 168 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNF396Q96N95 335 aaPredicted RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 TGM7Q96PF1 710 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 STN1Q9H668 368 aaKnown RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNF552Q9H707 407 aaPredicted RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 KCTD5Q9NXV2 234 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 CPNE7Q9UBL6 633 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms