RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 METTL6Q8TCB7 284 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 KCTD13Q8WZ19 329 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 C12orf43Q96C57 262 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 MRPL57Q9BQC6 102 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 MRPS26Q9BYN8 205 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 FANCEQ9HB96 536 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 EIF2B3Q9NR50 452 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 RNF11Q9Y3C5 154 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 USP3Q9Y6I4 520 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 A0A0J9YVX5 310 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 AP3B1O00203 1094 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 FBP2O00757 339 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 NBNO60934 754 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 CHEK2O96017 543 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 GOT2P00505 430 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 RPL17P18621 184 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 HMGCS1Q01581 520 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 DPYSQ14117 519 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SAMD4BQ5PRF9 694 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 OGFRL1Q5TC84 451 aaPredicted RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 OTUD1Q5VV17 481 aaPredicted RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 PIWIL3Q7Z3Z3 882 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 DHRSXQ8N5I4 330 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 CLDN19Q8N6F1 224 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 GPR21Q99679 349 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 GPR22Q99680 433 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SLC25A23Q9BV35 468 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 NMUR1Q9HB89 426 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 RIMS3Q9UJD0 308 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 ZNF229Q9UJW7 825 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 TCAF1Q9Y4C2 921 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 C5orf42Q9H799 3197 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 CCDC154A6NI56 674 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 H6PDO95479 791 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SBK3P0C264 359 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 CAPN3P20807 821 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 GLDCP23378 1020 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 HMOX2P30519 316 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SH3BP2P78314 561 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PURAQ00577 322 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 IL5RAQ01344 420 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 FRG1Q14331 258 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 DET1Q7L5Y6 550 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SIDT2Q8NBJ9 832 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 FAM162AQ96A26 154 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 ULK4Q96C45 1275 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 FEM1CQ96JP0 617 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PPP1R10Q96QC0 940 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 WDR6Q9NNW5 1121 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 CASS4Q9NQ75 786 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PKD2L2Q9NZM6 624 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PRPF19Q9UMS4 504 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 DMTF1Q9Y222 760 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 INVSQ9Y283 1065 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SLC45A1Q9Y2W3 748 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PCDHGA7Q9Y5G6 932 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SYNDIG1LA6NDD5 238 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 E9PAM4 449 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 CHRM5P08912 532 aaPredicted RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 MYL4P12829 197 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 ZNF37AP17032 561 aaPredicted RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 GKP32189 559 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 FAM189BP81408 668 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 LIPEQ05469 1076 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 NAB1Q13506 487 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 MAPRE2Q15555 327 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SPOUT1Q5T280 376 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 TSTD2Q5T7W7 516 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 TIFABQ6ZNK6 161 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 KCTD8Q6ZWB6 473 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SETD3Q86TU7 594 aaPredicted RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 RAVER1Q8IY67 606 aaKnown RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 RNF168Q8IYW5 571 aaPredicted RBP9.73□□□□□ -0.85
CMC1-209ENST00000477739 PHACTR4Q8IZ21 702 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 STYXQ8WUJ0 223 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 RSPH1Q8WYR4 309 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 GLMNQ92990 594 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 FBXO32Q969P5 355 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SLC2A13Q96QE2 648 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 SLC9A7Q96T83 725 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 CATSPERBQ9H7T0 1116 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 GMIPQ9P107 970 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 PTCH2Q9Y6C5 1203 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 VCANP13611 3396 aa9.73□□□□□ -0.85
CMC1-209ENST00000477739 MAP1BP46821 2468 aaKnown RBP9.72□□□□□ -0.85
CMC1-209ENST00000477739 A0A0D9SEW6 157 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 CCDC162PA2VCL2 907 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 TMEM114B3SHH9 223 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 NME4O00746 187 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 UBFD1O14562 309 aaKnown RBP9.72□□□□□ -0.85
CMC1-209ENST00000477739 AZIN1O14977 448 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 ALDH1A2O94788 518 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 FKBP9O95302 570 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 NTRK1P04629 796 aa9.72□□□□□ -0.85
CMC1-209ENST00000477739 OCM2P0CE71 109 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms