RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PHF13Q86YI8 300 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 GALNT13Q8IUC8 556 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 MCEEQ96PE7 176 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 CNPY3Q9BT09 278 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 VPS16Q9H269 839 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 GANQ9H2C0 597 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 CUEDC1Q9NWM3 386 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 PHTF1Q9UMS5 762 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 A0A0U1RQS6 177 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 CDC14CA4D256 554 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 KATNA1O75449 491 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 CALB1P05937 261 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 EPHA4P54764 986 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 RPL7AP62424 266 aaKnown RBP16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 FOXM1Q08050 763 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 SLC10A7Q0GE19 358 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 CA9Q16790 459 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 TMCO4Q5TGY1 634 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 ZNF787Q6DD87 383 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 NPWQ8N729 165 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 GALNT6Q8NCL4 622 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 SH3KBP1Q96B97 665 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 SCRN2Q96FV2 425 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 ABCG8Q9H221 673 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 CD84Q9UIB8 345 aa16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 PCYT1BQ9Y5K3 369 aaPredicted RBP16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 OAS3Q9Y6K5 1087 aaKnown RBP16.32■□□□□ 0.2
APOBEC3F-203ENST00000476513 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 DNAJB5O75953 348 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 ANKRD34CP0C6C1 535 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 ERCC2P18074 760 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 NFKBIAP25963 317 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 SOX5P35711 763 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 TRAF2Q12933 501 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 CLEC16AQ2KHT3 1053 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 DNAJC24Q6P3W2 148 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 IYDQ6PHW0 289 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 MON1BQ7L1V2 547 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 APLFQ8IW19 511 aaPredicted RBP16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 TP53INP2Q8IXH6 220 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 MLKLQ8NB16 471 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 SCAMP4Q969E2 229 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 AP2M1Q96CW1 435 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 MCCC1Q96RQ3 725 aaPredicted RBP16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 TBC1D10AQ9BXI6 508 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 TWSG1Q9GZX9 223 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 DHX35Q9H5Z1 703 aaKnown RBP16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 STN1Q9H668 368 aaKnown RBP16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 NOD2Q9HC29 1040 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 TBC1D29Q9UFV1 150 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 AP4E1Q9UPM8 1137 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 PRKAB1Q9Y478 270 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 MAP4K5Q9Y4K4 846 aa16.31■□□□□ 0.2
APOBEC3F-203ENST00000476513 MN1Q10571 1320 aaPredicted RBP16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 INPP4BO15327 924 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 DAPK3O43293 454 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 COL8A1P27658 744 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 JAM2P57087 298 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 OGDHQ02218 1023 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 CAMK4Q16566 473 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 RFX8Q6ZV50 586 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 SLC9B2Q86UD5 537 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 PLXDC1Q8IUK5 500 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 PGBD5Q8N414 524 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 STAMBPL1Q96FJ0 436 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 NUDCD1Q96RS6 583 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 TRIM55Q9BYV6 548 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 EPB41L1Q9H4G0 881 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 ZNHIT2Q9UHR6 403 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 KCND3Q9UK17 655 aa16.3■□□□□ 0.2
APOBEC3F-203ENST00000476513 PIPSLA2A3N6 862 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 A6NCN8 305 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 DNAJC6O75061 913 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 CREG1O75629 220 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 PGLSO95336 258 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 ASMTLO95671 621 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 DDAH2O95865 285 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 CTPS1P17812 591 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 KLK7P49862 253 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 GFERP55789 205 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 POLR2FP61218 127 aaKnown RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 SEMA5AQ13591 1074 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 ZNF235Q14590 738 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 ESPL1Q14674 2120 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 NADK2Q4G0N4 442 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 USP45Q70EL2 814 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 CHST15Q7LFX5 561 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 LYSMD3Q7Z3D4 306 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 COX14Q96I36 57 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 C9orf72Q96LT7 481 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 ZNF599Q96NL3 588 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 KCTD15Q96SI1 283 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 AGAP2Q99490 1192 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms