RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SNX15Q9NRS6 342 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 PCMTD2Q9NV79 361 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 SLC39A10Q9ULF5 831 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 GRID1Q9ULK0 1009 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 PPM1HQ9ULR3 514 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 ANKRD6Q9Y2G4 727 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 FNDC3AQ9Y2H6 1198 aaKnown RBP12.2□□□□□ -0.46
MRPL55-227ENST00000475832 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 ZFHX4Q86UP3 3567 aa12.2□□□□□ -0.46
MRPL55-227ENST00000475832 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 KRBA1A5PL33 1030 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 F8W8V4 182 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PSMD11O00231 422 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 CCL22O00626 93 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 NEMP1O14524 444 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 RFPL1O75677 317 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 SRP72O76094 671 aaKnown RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PDGFBP01127 241 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 CTSLP07711 333 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 GSTA1P08263 222 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 TIMP2P16035 220 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 STMN1P16949 149 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 SAT1P21673 171 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 CRHR1P34998 444 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 TIE1P35590 1138 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 CCNFP41002 786 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 STC1P52823 247 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 GNGT1P63211 74 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 MRPS21P82921 87 aaKnown RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 GABPB1Q06547 395 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PTPRCAPQ14761 206 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PON2Q15165 354 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 INSCQ1MX18 579 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 TYSND1Q2T9J0 566 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 HSF5Q4G112 596 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 NAIF1Q69YI7 327 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 SNX20Q7Z614 316 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 ZSWIM9Q86XI8 627 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 MGARPQ8TDB4 240 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 SREK1Q8WXA9 508 aaKnown RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 ULK4Q96C45 1275 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PLEKHG4BQ96PX9 1271 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 SMIM14Q96QK8 99 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 KLF6Q99612 283 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 HDAC8Q9BY41 377 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 SLC13A1Q9BZW2 595 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 ASB8Q9H765 288 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PCDH12Q9NPG4 1184 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 PRSS16Q9NQE7 514 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 HEBP1Q9NRV9 189 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 MTO1Q9Y2Z2 717 aaKnown RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 COMMD10Q9Y6G5 202 aa12.19□□□□□ -0.46
MRPL55-227ENST00000475832 EP300Q09472 2414 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-227ENST00000475832 ATRXP46100 2492 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 A0A087X1B8 175 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 A0A096LPK6 155 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 UBA6A0AVT1 1052 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 OR51F1A6NGY5 319 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 A8MX80 341 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 FOXO6A8MYZ6 492 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 K7EQS6 105 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 TYROBPO43914 113 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 HAUS5O94927 633 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 PRAMEF1O95521 474 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 S1PR4O95977 384 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 APOA4P06727 396 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ELFN1P0C7U0 828 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 NEFHP12036 1026 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 COL6A2P12110 1019 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 FOXN2P32314 431 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 WASP42768 502 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 PTGER3P43115 390 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 PSMD8P48556 350 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 RAB10P61026 200 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ENPP2Q13822 863 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 CDKN3Q16667 212 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ST3GAL2Q16842 350 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ZNF284Q2VY69 593 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 TMEM196Q5HYL7 178 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 FAM151BQ6UXP7 276 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 KYAT3Q6YP21 454 aaKnown RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ERN2Q76MJ5 926 aaKnown RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 PARS2Q7L3T8 475 aaKnown RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 MMAAQ8IVH4 418 aaKnown RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 MDM1Q8TC05 714 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ZNF398Q8TD17 642 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 FAM3CQ92520 227 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 ISL2Q96A47 359 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 FAM129BQ96TA1 746 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 FBRSL1Q9HCM7 1045 aaKnown RBP12.18□□□□□ -0.46
MRPL55-227ENST00000475832 KCTD5Q9NXV2 234 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 PSD3Q9NYI0 1048 aa12.18□□□□□ -0.46
MRPL55-227ENST00000475832 CRLS1Q9UJA2 301 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms