RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CFAP58Q5T655 872 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 KDM7AQ6ZMT4 941 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 CENPUQ71F23 418 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 PRUNE1Q86TP1 453 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 PROSER1Q86XN7 944 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 C1QTNF7Q9BXJ2 289 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 ATP13A3Q9H7F0 1226 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 MBNL1Q9NR56 388 aaKnown RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 NLGN3Q9NZ94 848 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 PNMA8BQ9ULN7 279 aaPredicted RBP15.64■□□□□ 0.09
CPSF3-203ENST00000475482 ATP8A1Q9Y2Q0 1164 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 LRP4O75096 1905 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 ZFHX4Q86UP3 3567 aa15.64■□□□□ 0.09
CPSF3-203ENST00000475482 RP1P56715 2156 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 LY6G6EA0A0G2JKS1 128 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 SRRM3A6NNA2 597 aaPredicted RBP15.63■□□□□ 0.09
CPSF3-203ENST00000475482 KCNK1O00180 336 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 HTRA2O43464 458 aaPredicted RBP15.63■□□□□ 0.09
CPSF3-203ENST00000475482 FAM153BP0C7A2 387 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 TPSB2P20231 275 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 SERPINA4P29622 427 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 RALGDSQ12967 914 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 SEMA5AQ13591 1074 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 TPSAB1Q15661 275 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 FAM153CQ494X1 144 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 ZNF542PQ5EBM4 170 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 ALS2CLQ60I27 953 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 TRMT10CQ7L0Y3 403 aaKnown RBP15.63■□□□□ 0.09
CPSF3-203ENST00000475482 TMC3Q7Z5M5 1100 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 CCDC25Q86WR0 208 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 MARCH9Q86YJ5 346 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 PDIK1LQ8N165 341 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 ZNF567Q8N184 647 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 PGBD5Q8N414 524 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 NAT8LQ8N9F0 302 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 ZNF548Q8NEK5 533 aaPredicted RBP15.63■□□□□ 0.09
CPSF3-203ENST00000475482 CPT1BQ92523 772 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 TBATAQ96M53 351 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 MGME1Q9BQP7 344 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 WRAP53Q9BUR4 548 aaKnown RBP15.63■□□□□ 0.09
CPSF3-203ENST00000475482 ETNK1Q9HBU6 452 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 DNAJC28Q9NX36 388 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 FAM153AQ9UHL3 310 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 RSPH14Q9UHP6 348 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 U3KQA8 63 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 CELSR3Q9NYQ7 3312 aa15.63■□□□□ 0.09
CPSF3-203ENST00000475482 DSPP15924 2871 aaKnown RBP15.62■□□□□ 0.09
CPSF3-203ENST00000475482 NEMP2A6NFY4 417 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 K7ESM1 405 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 AP3B1O00203 1094 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 JCHAINP01591 159 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 APRTP07741 180 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 CKMT1AP12532 417 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 C6P13671 934 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 XPAP23025 273 aaPredicted RBP15.62■□□□□ 0.09
CPSF3-203ENST00000475482 SCNN1BP51168 640 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 PMS2P54278 862 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 BCL2L1Q07817 233 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 PTK2BQ14289 1009 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 KCNJ11Q14654 390 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 IRF4Q15306 451 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 HIF1AQ16665 826 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 WSCD2Q2TBF2 565 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 MARC1Q5VT66 337 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 ERAP2Q6P179 960 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 RELL1Q8IUW5 271 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 TEX26Q8N6G2 289 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 MCUQ8NE86 351 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 MAML1Q92585 1016 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 TEKT5Q96M29 485 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 TTC25Q96NG3 672 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 NUDCD1Q96RS6 583 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 RBM15Q96T37 977 aaKnown RBP eCLIP15.62■□□□□ 0.09
CPSF3-203ENST00000475482 RUFY1Q96T51 708 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 IL12RB2Q99665 862 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 DUSP23Q9BVJ7 150 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 FUT8Q9BYC5 575 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 GBA3Q9H227 469 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 AAR2Q9Y312 384 aaKnown RBP15.62■□□□□ 0.09
CPSF3-203ENST00000475482 LAMA5O15230 3695 aa15.62■□□□□ 0.09
CPSF3-203ENST00000475482 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.61■□□□□ 0.09
CPSF3-203ENST00000475482 FAM149AA5PLN7 773 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 TRABD2BA6NFA1 517 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 H3BM21 787 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 TPP1O14773 563 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 ANXA9O76027 345 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 JUNDP17535 347 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 GM2AP17900 193 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 LIG3P49916 1009 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 POLR2LP62875 67 aaKnown RBP15.61■□□□□ 0.09
CPSF3-203ENST00000475482 LRRC14Q15048 493 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 CCDC157Q569K6 752 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 RALGPS1Q5JS13 557 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 MACC1Q6ZN28 852 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 CBARPQ8N350 705 aaPredicted RBP15.61■□□□□ 0.09
CPSF3-203ENST00000475482 PDCD7Q8N8D1 485 aaKnown RBP15.61■□□□□ 0.09
CPSF3-203ENST00000475482 LRRN4Q8WUT4 740 aa15.61■□□□□ 0.09
CPSF3-203ENST00000475482 UBLCP1Q8WVY7 318 aaPredicted RBP15.61■□□□□ 0.09
CPSF3-203ENST00000475482 APOLD1Q96LR9 279 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms