RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SLC9B2Q86UD5 537 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 NLRP8Q86W28 1048 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 PSTKQ8IV42 348 aaKnown RBP12.52□□□□□ -0.41
SKA3-206ENST00000475251 ARHGAP12Q8IWW6 846 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 PTCD2Q8WV60 388 aaKnown RBP12.52□□□□□ -0.41
SKA3-206ENST00000475251 NCSTNQ92542 709 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 AP2M1Q96CW1 435 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 POLHQ9Y253 713 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
SKA3-206ENST00000475251 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 RNF8O76064 485 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 AGFG2O95081 481 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ANKRD34CP0C6C1 535 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 CCDC172P0C7W6 258 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ZNF30P17039 623 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 PSMA2P25787 234 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 HCAR3P49019 387 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 SLC10A7Q0GE19 358 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 PPP6R3Q5H9R7 873 aaPredicted RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 ARMC12Q5T9G4 340 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ASB18Q6ZVZ8 466 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ZNF765Q7L2R6 523 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 TECPR1Q7Z6L1 1165 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ZNF761Q86XN6 746 aaPredicted RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 PLXDC1Q8IUK5 500 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 MCCC1Q96RQ3 725 aaPredicted RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 ZWILCHQ9H900 591 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 GPATCH2LQ9NWQ4 482 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 TAB2Q9NYJ8 693 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 PLEKHB1Q9UF11 243 aaPredicted RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 CNOT8Q9UFF9 292 aaKnown RBP12.51□□□□□ -0.41
SKA3-206ENST00000475251 KCND3Q9UK17 655 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 DNPEPQ9ULA0 475 aa12.51□□□□□ -0.41
SKA3-206ENST00000475251 TRBV23OR9-2A0A075B6M9 112 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 KIR2DS5A0A0G2JLQ3 304 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 A0A0G2JNG1 304 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 OR5K4A6NMS3 321 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 KIR2DS3K7RE56 304 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 PRPSAP2O60256 369 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 RFPL1O75677 317 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 PGLSO95336 258 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 ASMTLO95671 621 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 KRT7P08729 469 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 DLSTP36957 453 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 MAPK9P45984 424 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 NFATC2Q13469 925 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 KIR2DS5Q14953 304 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 CYB5D1Q6P9G0 228 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 MARK2Q7KZI7 788 aaKnown RBP12.5□□□□□ -0.41
SKA3-206ENST00000475251 RAVER1Q8IY67 606 aaKnown RBP12.5□□□□□ -0.41
SKA3-206ENST00000475251 NPWQ8N729 165 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 GALNT11Q8NCW6 608 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 SEC14L1Q92503 715 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 STAMBPL1Q96FJ0 436 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 AGPAT1Q99943 283 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 SNRNP25Q9BV90 132 aaKnown RBP12.5□□□□□ -0.41
SKA3-206ENST00000475251 RMI1Q9H9A7 625 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 NOD2Q9HC29 1040 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 APMAPQ9HDC9 416 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 PARVAQ9NVD7 372 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 VPS18Q9P253 973 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 TMEM98Q9Y2Y6 226 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 PLEKHM1Q9Y4G2 1056 aa12.5□□□□□ -0.41
SKA3-206ENST00000475251 MN1Q10571 1320 aaPredicted RBP12.49□□□□□ -0.41
SKA3-206ENST00000475251 TOX3O15405 576 aaPredicted RBP12.49□□□□□ -0.41
SKA3-206ENST00000475251 RECKO95980 971 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 SOD1P00441 154 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 CCNYL3P0C7X3 344 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 KLK7P49862 253 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 MLLT10P55197 1068 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 OGDHQ02218 1023 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 FOXM1Q08050 763 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 TRAF2Q12933 501 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 CA9Q16790 459 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 ATP1A1-AS1Q5TC04 95 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 LRRC66Q68CR7 880 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 ACAD10Q6JQN1 1059 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 IYDQ6PHW0 289 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 C6orf15Q6UXA7 325 aaPredicted RBP12.49□□□□□ -0.41
SKA3-206ENST00000475251 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 MCOLN2Q8IZK6 566 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 COX14Q96I36 57 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 NSMCE3Q96MG7 304 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
SKA3-206ENST00000475251 KCTD15Q96SI1 283 aaPredicted RBP12.49□□□□□ -0.41
SKA3-206ENST00000475251 ABCG8Q9H221 673 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 KLHL3Q9UH77 587 aa12.49□□□□□ -0.41
SKA3-206ENST00000475251 PCSK1NQ9UHG2 260 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms