RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 NPFFR2Q9Y5X5 522 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TIAM2Q8IVF5 1701 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF729A6NN14 1252 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 HAS3O00219 553 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 POLRMTO00411 1230 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 KCNAB3O43448 404 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 SUN1O94901 812 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CAPN1P07384 714 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 KRT7P08729 469 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CD63P08962 238 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 OCM2P0CE71 109 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 OCMP0CE72 109 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 PTPN1P18031 435 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 MARCKSP29966 332 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 HSPA9P38646 679 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CLDN8P56748 225 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 HAND2P61296 217 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 MRPS11P82912 194 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 IFITM3Q01628 133 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ALDH6A1Q02252 535 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ST3GAL1Q11201 340 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 STK4Q13043 487 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 EFR3AQ14156 821 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 LETMD1Q6P1Q0 360 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 MTFR2Q6P444 385 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TMEM81Q6P7N7 255 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 SLC39A5Q6ZMH5 540 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CCDC103Q8IW40 242 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CPNE9Q8IYJ1 553 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ADSSL1Q8N142 457 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 LRRC18Q8N456 261 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TTC29Q8NA56 475 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 SLC17A8Q8NDX2 589 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 PSMA8Q8TAA3 256 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 VANGL1Q8TAA9 524 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 METTL6Q8TCB7 284 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CPT1BQ92523 772 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 IGSF21Q96ID5 467 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF385AQ96PM9 386 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 GLIS2Q9BZE0 524 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 SLC19A3Q9BZV2 496 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NSMCE4AQ9NXX6 385 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 BTNL2Q9UIR0 455 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CDK5RAP2Q96SN8 1893 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 MAST2Q6P0Q8 1798 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 MYO5AQ9Y4I1 1855 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 OR14I1A6ND48 311 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 H0YCG3 227 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 H0YGN5 161 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 KLHL18O94889 574 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 HTR3BO95264 441 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 HSPD1P10809 573 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 RHOQP17081 205 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CDH2P19022 906 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 MAPK3P27361 379 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 RPA1P27694 616 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ETV5P41161 510 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 GRIA1P42261 906 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 IREB2P48200 963 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 CDK16Q00536 496 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF91Q05481 1191 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 PAK1Q13153 545 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NAB1Q13506 487 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TRA2AQ13595 282 aaKnown RBP eCLIP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TOB2Q14106 344 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ITIH4Q14624 930 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 PDK2Q15119 407 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TRIP13Q15645 432 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TDRD12Q587J7 1177 aaKnown RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 DLEU7Q6UYE1 221 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 KRT25Q7Z3Z0 450 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 HEATR3Q7Z4Q2 680 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TRIM59Q8IWR1 403 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 DMBX1Q8NFW5 382 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 OR6X1Q8NH79 312 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TBC1D15Q8TC07 691 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 DEPDC1BQ8WUY9 529 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 UFD1Q92890 307 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 TRIM63Q969Q1 353 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 PGAP3Q96FM1 320 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 IDI2Q9BXS1 227 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ACTR6Q9GZN1 396 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 ASCL3Q9NQ33 180 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 APEX2Q9UBZ4 518 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 KCND3Q9UK17 655 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NDUFAF1Q9Y375 327 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 UGT2A1Q9Y4X1 527 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NFS1Q9Y697 457 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 WASF2Q9Y6W5 498 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NEDD4P46934 1319 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 RPTORQ8N122 1335 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 A4D1N5 150 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NKRFO15226 690 aaKnown RBP eCLIP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NUAK1O60285 661 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 NOS1APO75052 506 aaPredicted RBP4.87□□□□□ -1.63
NPHP3-206ENST00000474871 SOAT2O75908 522 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 PDGFAP04085 211 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 SLC7A1P30825 629 aa4.87□□□□□ -1.63
NPHP3-206ENST00000474871 APOBEC3AP31941 199 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms