RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CBARPQ8N350 705 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 TEX19Q8NA77 164 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF511Q8NB15 262 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 GALNT11Q8NCW6 608 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC30A5Q8TAD4 765 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC37A2Q8TED4 501 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 NUS1Q96E22 293 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 DTD2Q96FN9 168 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SCARF2Q96GP6 870 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 C11orf70Q9BRQ4 267 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 ZPBPQ9BS86 351 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 TRIT1Q9H3H1 467 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 NDST4Q9H3R1 872 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 CATSPERBQ9H7T0 1116 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 APMAPQ9HDC9 416 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 FBXO8Q9NRD0 319 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 B4GALT6Q9UBX8 382 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 PHTF1Q9UMS5 762 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC17A4Q9Y2C5 497 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 PLEKHM1Q9Y4G2 1056 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 RPS6KL1Q9Y6S9 549 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 ESPL1Q14674 2120 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 HIVEP1P15822 2718 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ARHGAP42A6NI28 874 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 A8MU76 341 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CCP110O43303 1012 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 HTRA2O43464 458 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SEMA7AO75326 666 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 VPS4BO75351 444 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 RFPL1O75677 317 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 PALMO75781 387 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 HEXIM1O94992 359 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 MAP3K6O95382 1288 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 EML2O95834 649 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SOD1P00441 154 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 PDGFAP04085 211 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 KRT3P12035 628 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CHRNB2P17787 502 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 GPD1P21695 349 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 GNLYP22749 145 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 LHCGRP22888 699 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 TEAD1P28347 426 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ERCC5P28715 1186 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 VIPR1P32241 457 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 HTR7P34969 479 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ETV3P41162 512 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 PAPOLAP51003 745 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 NDST2P52849 883 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 COPB1P53618 953 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 PMS2P54278 862 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 AP1S1P61966 158 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 POLR2LP62875 67 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CDR2Q01850 454 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 NSUN2Q08J23 767 aaKnown RBP eCLIP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 MAP7Q14244 749 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 TUSC1Q2TAM9 212 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 VWA3BQ502W6 1294 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 WDR59Q6PJI9 974 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 DOK6Q6PKX4 331 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ARHGAP36Q6ZRI8 547 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ASB18Q6ZVZ8 466 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 KDELC2Q7Z4H8 507 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 HSD11B1LQ7Z5J1 315 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 TICAM1Q8IUC6 712 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ARHGAP12Q8IWW6 846 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC34A3Q8N130 599 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SFRP1Q8N474 314 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 ESX1Q8N693 406 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 C3orf20Q8ND61 904 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 OR10G6Q8NH81 332 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SSC4DQ8WTU2 575 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 AHCYL2Q96HN2 611 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CELF6Q96J87 481 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 PSKH2Q96QS6 385 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 OR2M4Q96R27 311 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC38A3Q99624 504 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CINPQ9BW66 212 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 STK33Q9BYT3 514 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC39A8Q9C0K1 460 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 PRDM8Q9NQV8 689 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SIDT1Q9NXL6 827 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 KCTD5Q9NXV2 234 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 DONSONQ9NYP3 566 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 CROTQ9UKG9 612 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 FZD10Q9ULW2 581 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 VPS4AQ9UN37 437 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 SHANK1Q9Y566 2161 aa5.1□□□□□ -1.59
SNRNP40-204ENST00000474025 MED13Q9UHV7 2174 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 NIPBLQ6KC79 2804 aaeCLIP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 MN1Q10571 1320 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TCRBV5S1A1TA0A578 114 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 A1L4Q6 167 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 A6NCN8 305 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GOLGA6CA6NDK9 693 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 GOLGA6BA6NDN3 693 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 NPIPB15A6NHN6 443 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 SIGLEC16A6NMB1 481 aa5.09□□□□□ -1.59
SNRNP40-204ENST00000474025 TTLL8A6PVC2 850 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms