RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SIRPAP78324 504 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 TMF1P82094 1093 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 MAD2L1Q13257 205 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 TNIP1Q15025 636 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 ODF2Q5BJF6 829 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF805Q5CZA5 627 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 PPP6R3Q5H9R7 873 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 KRBOX4Q5JUW0 171 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 Q5PR19 223 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 PAPD7Q5XG87 772 aaKnown RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 TMEM71Q6P5X7 295 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 PCSK4Q6UW60 755 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 PARM1Q6UWI2 310 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF782Q6ZMW2 699 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 MON1BQ7L1V2 547 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 TAOK1Q7L7X3 1001 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 MMP21Q8N119 569 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 OR8H3Q8N146 312 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 CCAR2Q8N163 923 aaKnown RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 TMEM174Q8WUU8 243 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 DEPDC1BQ8WUY9 529 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 DNAAF4Q8WXU2 420 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 SIPA1Q96FS4 1042 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 DACH2Q96NX9 599 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 CITED2Q99967 270 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 WDR77Q9BQA1 342 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 TRMOQ9BU70 441 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 SPATC1LQ9H0A9 340 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 NRIP3Q9NQ35 241 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 DDX4Q9NQI0 724 aaKnown RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 DNAJB4Q9UDY4 337 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 STK39Q9UEW8 545 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 A0A1B0GVM2 712 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CPED1A4D0V7 1026 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 MS4A18H0YCH9 400 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 IFNL4K9M1U5 179 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ADAMDEC1O15204 470 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 TLR2O60603 784 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CNOT3O75175 753 aaKnown RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 C1QL1O75973 258 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 LATS1O95835 1130 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CHRNB1P11230 501 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ITGB6P18564 788 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 MAOAP21397 527 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 FBLP22087 321 aaKnown RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 DEKP35659 375 aaKnown RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 TNNT3P45378 269 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ECT2LQ008S8 904 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 NHLH1Q02575 133 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 LETM2Q2VYF4 491 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CEP78Q5JTW2 689 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 FAM47EQ6ZV65 393 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ERN2Q76MJ5 926 aaKnown RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 PLPPR4Q7Z2D5 763 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 HAUS6Q7Z4H7 955 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ADCK2Q7Z695 626 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CCDC190Q86UF4 302 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 SPATA6LQ8N4H0 392 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 TC2NQ8N9U0 490 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 OR1J2Q8NGS2 313 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 KIF18AQ8NI77 898 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 TRIB2Q92519 343 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 MRPS27Q92552 414 aaKnown RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ARSGQ96EG1 525 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 JAKMIP1Q96N16 626 aaKnown RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 SMC6Q96SB8 1091 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 HGH1Q9BTY7 390 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 SLC25A23Q9BV35 468 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 PPP1R3EQ9H7J1 279 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 MAP6D1Q9H9H5 199 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CHMP1AQ9HD42 196 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 MKKSQ9NPJ1 570 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-212ENST00000473961 TMEM51Q9NW97 253 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 GDE1Q9NZC3 331 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 TUBE1Q9UJT0 475 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 DMRT1Q9Y5R6 373 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 CLIC4Q9Y696 253 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 ZMYM2Q9UBW7 1377 aa4.27□□□□□ -1.73
BRCA1-212ENST00000473961 SMIM35A0A1B0GVV1 85 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 LRRC3CA6NJW4 275 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 EIF4E1BA6NMX2 242 aaKnown RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 A6NNC1 897 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 MAGEB17A8MXT2 336 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 M0QZ24 198 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 WNT9BO14905 357 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ITM2AO43736 263 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 PRAMEF11O60813 436 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 SLU7O95391 586 aaKnown RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 IFNAR1P17181 557 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ATP5DP30049 168 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 GP5P40197 560 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ARHGAP25P42331 645 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ZP1P60852 638 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 PPARDQ03181 441 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 FOXM1Q08050 763 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms