RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ZBTB49Q6ZSB9 765 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ERMP1Q7Z2K6 904 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 LRRC49Q8IUZ0 686 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CLYBLQ8N0X4 340 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 FAM47BQ8NA70 645 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ZBTB8BQ8NAP8 495 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 PPP1R2P1Q96PQ5 205 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CCT7Q99832 543 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 SEMA3CQ99985 751 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TRMOQ9BU70 441 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TRIM62Q9BVG3 475 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ANKRD60Q9BZ19 345 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 SMOXQ9NWM0 555 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 SLAMF8Q9P0V8 285 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF225Q9UK10 706 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 PADI4Q9UM07 663 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 USP22Q9UPT9 525 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 WDR37Q9Y2I8 494 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 FAM155AB1AL88 458 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 GPR182O15218 404 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CD3EAPO15446 510 aaKnown RBP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 HMBSP08397 361 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 MTHFD1P11586 935 aaKnown RBP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 BMP2P12643 396 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF23P17027 643 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ALDH3B2P48448 385 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 PPP4R4Q6NUP7 873 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CBR4Q8N4T8 237 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 AFAP1L2Q8N4X5 818 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 VPS33AQ96AX1 596 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 B3GALT6Q96L58 329 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 SYT17Q9BSW7 474 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CCM2LQ9NUG4 571 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ARMC1Q9NVT9 282 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 AURKCQ9UQB9 309 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ASB1Q9Y576 335 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TIMM22Q9Y584 194 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 A0A0D9SEW6 157 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 AZIN1O14977 448 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 CLASP2O75122 1294 aaKnown RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 FGF4P08620 206 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 HGFP14210 728 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 CDKN1CP49918 316 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 AGTR2P50052 363 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ATP4BP51164 291 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SUOXP51687 545 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 POLD3Q15054 466 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 MAPRE1Q15691 268 aaKnown RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 RABL3Q5HYI8 236 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 UGT3A1Q6NUS8 523 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ARMCX6Q7L4S7 300 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 MON1AQ86VX9 555 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 DDIASQ8IXT1 998 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 THEM5Q8N1Q8 247 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ATAD1Q8NBU5 361 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ESAMQ96AP7 390 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ROPN1LQ96C74 230 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SLC30A3Q99726 388 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ZBED2Q9BTP6 218 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SEMA4BQ9NPR2 832 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SDR39U1Q9NRG7 319 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SCML2Q9UQR0 700 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 FAM50BQ9Y247 325 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 A0A0U1RQS6 177 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 TMX2-CTNND1H3BSU7 103 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 TRMUO75648 421 aaKnown RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF24P17028 368 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SLC26A3P40879 764 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 EMP3P54852 163 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 SERINC3Q13530 473 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 PTPRRQ15256 657 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 GEN1Q17RS7 908 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 PYCR3Q53H96 274 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 NADSYN1Q6IA69 706 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 PAQR3Q6TCH7 311 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 CPNE9Q8IYJ1 553 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 DCBLD1Q8N8Z6 715 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 NUDT8Q8WV74 236 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 PBXIP1Q96AQ6 731 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 PPP1R14BQ96C90 147 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 TUBGCP3Q96CW5 907 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 MTG1Q9BT17 334 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 MRPL40Q9NQ50 206 aaKnown RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 AGPAT4Q9NRZ5 378 aa10.9□□□□□ -0.66
C9orf3-214ENST00000473778 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
C9orf3-214ENST00000473778 CDC7O00311 574 aa10.89□□□□□ -0.67
C9orf3-214ENST00000473778 ENPP3O14638 875 aa10.89□□□□□ -0.67
C9orf3-214ENST00000473778 ACOX3O15254 700 aa10.89□□□□□ -0.67
C9orf3-214ENST00000473778 DUSP11O75319 330 aaKnown RBP10.89□□□□□ -0.67
C9orf3-214ENST00000473778 GLP2RO95838 553 aa10.89□□□□□ -0.67
C9orf3-214ENST00000473778 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
C9orf3-214ENST00000473778 AKR1A1P14550 325 aa10.89□□□□□ -0.67
C9orf3-214ENST00000473778 NCK1P16333 377 aa10.89□□□□□ -0.67
C9orf3-214ENST00000473778 EEF1DP29692 281 aaKnown RBP10.89□□□□□ -0.67
C9orf3-214ENST00000473778 RGRP47804 291 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms