RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MEA1Q16626 185 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 PTGISQ16647 500 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 B3GNTL1Q67FW5 361 aaPredicted RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 NAIF1Q69YI7 327 aaPredicted RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 PDXDC1Q6P996 788 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 TMEM154Q6P9G4 183 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 TMEM88Q6PEY1 159 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 LRRC55Q6ZSA7 311 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 PARS2Q7L3T8 475 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 DTX2Q86UW9 622 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 TEX11Q8IYF3 940 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 VPS52Q8N1B4 723 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 SRBD1Q8N5C6 995 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 Q8N9P0 234 aaPredicted RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 DNAAF1Q8NEP3 725 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ZMIZ2Q8NF64 920 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ABHD11Q8NFV4 315 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 OR52L2PQ8NGH6 319 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ADAMTS18Q8TE60 1221 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 POMGNT1Q8WZA1 660 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 NCSTNQ92542 709 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 CNOT9Q92600 299 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 ATP2A3Q93084 1043 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 RSRC1Q96IZ7 334 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 PGBD1Q96JS3 809 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 CNDP2Q96KP4 475 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 SPATA17Q96L03 361 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 WDR24Q96S15 920 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 FUZQ9BT04 418 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 PI4K2AQ9BTU6 479 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ALG8Q9BVK2 526 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ADGRE3Q9BY15 652 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 IFIH1Q9BYX4 1025 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 CTDSP1Q9GZU7 261 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 RANBP17Q9H2T7 1088 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 GHITMQ9H3K2 345 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 RPAP3Q9H6T3 665 aaPredicted RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 SH2D4AQ9H788 454 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 KAT14Q9H8E8 782 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 PCDHB16Q9NRJ7 776 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ANKEF1Q9NU02 776 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 THAP1Q9NVV9 213 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 CWC25Q9NXE8 425 aaPredicted RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 EHD3Q9NZN3 535 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 EHD2Q9NZN4 543 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 TBC1D14Q9P2M4 693 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 TBC1D29Q9UFV1 150 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 LIMA1Q9UHB6 759 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 PCDHGB4Q9UN71 923 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 DHDHQ9UQ10 334 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 LYVE1Q9Y5Y7 322 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 PSAT1Q9Y617 370 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 FBN1P35555 2871 aaKnown RBP2.45□□□□□ -2.02
CALD1-216ENST00000473714 PI4KAP42356 2102 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 ATRQ13535 2644 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 NAV1Q8NEY1 1877 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 FLNCQ14315 2725 aa2.45□□□□□ -2.02
CALD1-216ENST00000473714 EMSYQ7Z589 1322 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ANKHD1Q8IWZ3 2542 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 OTOGQ6ZRI0 2925 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 FAM170AA1A519 330 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 DNAJC9-AS1A6NH13 148 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 C16orf96A6NNT2 1141 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 VILLO15195 856 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 RRP8O43159 456 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 AHCYL1O43865 530 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 DHX16O60231 1041 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 PLOD3O60568 738 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 PAPSS2O95340 614 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 CBX6O95503 412 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 METTL18O95568 372 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 TTLL1O95922 423 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 RHOP08100 348 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ELANEP08246 267 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 IL6RP08887 468 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 NPSP0C0P6 89 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ACP5P13686 325 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 COX7A2P14406 83 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 AKR1B1P15121 316 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MATN1P21941 496 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 PSMA4P25789 261 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 GCH1P30793 250 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 HTR7P34969 479 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 COPB2P35606 906 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SKIV2L2P42285 1042 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 CXCL12P48061 93 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 VPS41P49754 854 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 EIF3BP55884 814 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 UFM1P61960 85 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 BTG3Q14201 252 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 VEPH1Q14D04 833 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MED22Q15528 200 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MLF2Q15773 248 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 KRT24Q2M2I5 525 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 TMEM266Q2M3C6 531 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 EDRF1Q3B7T1 1238 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ZSCAN23Q3MJ62 389 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 FAM153CQ494X1 144 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms