RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PGLSO95336 258 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 TCN2P20062 427 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 GNLYP22749 145 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 AMPD1P23109 780 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 MAPK9P45984 424 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 GPR1P46091 355 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 PPM1FP49593 454 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-209ENST00000473421 AIF1P55008 147 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 RAB15P59190 212 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 SH3BP2P78314 561 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 GPLD1P80108 840 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 ABHD18Q0P651 414 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 KLRB1Q12918 225 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 MAMLD1Q13495 774 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 ERV3-1Q14264 604 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 LRRC66Q68CR7 880 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-209ENST00000473421 KDELC2Q7Z4H8 507 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-209ENST00000473421 SCRN2Q96FV2 425 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 AHCYL2Q96HN2 611 aaKnown RBP12.52□□□□□ -0.41
TRAF4-209ENST00000473421 COX14Q96I36 57 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 WDR24Q96S15 920 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 OGFRQ9NZT2 677 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-209ENST00000473421 KCNK6Q9Y257 313 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
TRAF4-209ENST00000473421 TMCO5BA8MYB1 307 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 CAPN5O15484 640 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 DAPK3O43293 454 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 MAFKO60675 156 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 PSMA2P25787 234 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 IL1R2P27930 398 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 TEAD1P28347 426 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 MIPP30301 263 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 HHEXQ03014 270 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 DPTQ07507 201 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 RFTN1Q14699 578 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 SYCP1Q15431 976 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF648Q5T619 568 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 CDKAL1Q5VV42 579 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ACAD10Q6JQN1 1059 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 DCUN1D2Q6PH85 259 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 IYDQ6PHW0 289 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 CEACAM20Q6UY09 585 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ADAMTSL4Q6UY14 1074 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 CHST15Q7LFX5 561 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 GALNT6Q8NCL4 622 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 OR10G6Q8NH81 332 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 AP2M1Q96CW1 435 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ELMO2Q96JJ3 720 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 TEFMQ96QE5 360 aaKnown RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 MGME1Q9BQP7 344 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 SYT11Q9BT88 431 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 RIOK2Q9BVS4 552 aaKnown RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 CLSTN2Q9H4D0 955 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 AKIRIN1Q9H9L7 192 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 SCHIP1Q9P0W5 487 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-209ENST00000473421 ZNHIT2Q9UHR6 403 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 CROTQ9UKG9 612 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 PHTF1Q9UMS5 762 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 SLC30A1Q9Y6M5 507 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
TRAF4-209ENST00000473421 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-209ENST00000473421 POLR1CO15160 346 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-209ENST00000473421 KIF1CO43896 1103 aaKnown RBP12.5□□□□□ -0.41
TRAF4-209ENST00000473421 SOCS5O75159 536 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 EEF1GP26641 437 aaKnown RBP12.5□□□□□ -0.41
TRAF4-209ENST00000473421 COL8A1P27658 744 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 HTR7P34969 479 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 DLSTP36957 453 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 UBE2HP62256 183 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 TXNRD3NBQ6F5E7 133 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 CAPRIN2Q6IMN6 1127 aaKnown RBP12.5□□□□□ -0.41
TRAF4-209ENST00000473421 ASB18Q6ZVZ8 466 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 ARFGAP3Q9NP61 516 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 PRDM8Q9NQV8 689 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 DTLQ9NZJ0 730 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 MED13Q9UHV7 2174 aa12.5□□□□□ -0.41
TRAF4-209ENST00000473421 CRYBG3Q68DQ2 2970 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 A1L4Q6 167 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 TMEM191CA6NGB0 347 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 FADS2P1A8MWK0 482 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 PSMD11O00231 422 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 ZW10O43264 779 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 FZD6O60353 706 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 SNX2O60749 519 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 LRCH4O75427 683 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 TIAF1O95411 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms