RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MRPL38Q96DV4 380 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 DTD2Q96FN9 168 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SNX18Q96RF0 628 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 LMF1Q96S06 567 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 DDOQ99489 341 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 HNRNPABQ99729 332 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 WDR83Q9BRX9 315 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 GATA5Q9BWX5 397 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 MOV10L1Q9BXT6 1211 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 TMEM206Q9H813 350 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 MMRN2Q9H8L6 949 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 KCTD5Q9NXV2 234 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ASIC5Q9NY37 505 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 COPG2Q9UBF2 871 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SPASTQ9UBP0 616 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 HEY2Q9UBP5 337 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 HEMK1Q9Y5R4 338 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 CLIC4Q9Y696 253 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SIRT4Q9Y6E7 314 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 AP1M2Q9Y6Q5 423 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PRAG1Q86YV5 1406 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PLCH1Q4KWH8 1693 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ETV2O00321 342 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 ADAM12O43184 909 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 EXOC3O60645 756 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 UGDHO60701 494 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 HMMRO75330 724 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SEC22BO75396 215 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 DIRAS3O95661 229 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 TRUB2O95900 331 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 C1QTNF9P0C862 333 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 APEHP13798 732 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 ST6GAL1P15907 406 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZNF37AP17032 561 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 PSMB4P28070 264 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PIGAP37287 484 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PITPNBP48739 271 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 LMAN1P49257 510 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 NT5C2P49902 561 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 BMXP51813 675 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 DGKQP52824 942 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 RFTN1Q14699 578 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 GSTA3Q16772 222 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 FBLN7Q53RD9 439 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PRAMEF19Q5SWL8 479 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 LRCH2Q5VUJ6 765 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PRAMEF8Q5VWM4 474 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ATG9BQ674R7 924 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ARHGAP11AQ6P4F7 1023 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SLC27A1Q6PCB7 646 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 DRICH1Q6PGQ1 229 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 GLB1LQ6UWU2 654 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 OLFM4Q6UX06 510 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 DHRS13Q6UX07 377 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 RAD9BQ6WBX8 426 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZBTB49Q6ZSB9 765 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZSWIM9Q86XI8 627 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 CEP57Q86XR8 500 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 UNC5CLQ8IV45 518 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 AQP12AQ8IXF9 295 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 TMEM132CQ8N3T6 1108 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 GALNT16Q8N428 558 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZNF808Q8N4W9 903 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 ENDOVQ8N8Q3 282 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 GJC3Q8NFK1 279 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 OR52L2PQ8NGH6 319 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 HUS1BQ8NHY5 278 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 CAGE1Q8TC20 777 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 VPS50Q96JG6 964 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZNF668Q96K58 619 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 CRAMP1Q96RY5 1269 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 MNTQ99583 582 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZNF559Q9BR84 538 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.69□□□□□ -1.98
XRN1-210ENST00000472697 SLCO5A1Q9H2Y9 848 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 CHMP4BQ9H444 224 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 MRPL44Q9H9J2 332 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 SEBOXQ9HB31 216 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 MYNNQ9NPC7 610 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 GDE1Q9NZC3 331 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 NTMQ9P121 344 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 UBA2Q9UBT2 640 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 SUFUQ9UMX1 484 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 WDR90Q96KV7 1748 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SALL3Q9BXA9 1300 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 PLEKHG1Q9ULL1 1385 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 IQGAP3Q86VI3 1631 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 KIF1AQ12756 1690 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 CAMTA1Q9Y6Y1 1673 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 NRAPQ86VF7 1730 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 A0A1W2PS29 197 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 MAGEA13PA6NCF6 341 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 OR6C68A6NDL8 312 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 MARCH11A6NNE9 402 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 A8MVJ9 347 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 VCYO14598 125 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 ZNF217O75362 1048 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 NDUFA10O95299 355 aa2.68□□□□□ -1.98
XRN1-210ENST00000472697 CALCAP01258 141 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms