RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TBC1D3FA6NER0 549 aaPredicted RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 YJEFN3A6XGL0 299 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3LB9A6J9 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 E7ENQ6 273 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TMX2-CTNND1H3BSU7 103 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 J3QKU1 62 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 O00370 1275 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PLK4O00444 970 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TOR1BO14657 336 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 MID1O15344 667 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ARHGAP6O43182 974 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PLRG1O43660 514 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 KLRC4O43908 158 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 BRINP1O60477 761 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FGFR1OPO95684 399 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 IL1BP01584 269 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 IGHV4-34P06331 123 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3HP0C7X1 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SFTPCP11686 197 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PFKFB1P16118 471 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ZNF18P17022 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 RBMS1P29558 406 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 AKT2P31751 481 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 CCR1P32246 355 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SLC8A1P32418 973 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 CSKP41240 450 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 RECQLP46063 649 aaPredicted RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 PSMD8P48556 350 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 RAD23BP54727 409 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 GALCP54803 685 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 INHBCP55103 352 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 GEMIN4P57678 1058 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 HNRNPKP61978 463 aaKnown RBP eCLIP3.58□□□□□ -1.84
XRN1-209ENST00000472625 KRT83P78385 493 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 BNC1Q01954 994 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SEMG2Q02383 582 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 CFHR1Q03591 330 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TLE3Q04726 772 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PPP3CAQ08209 521 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TARDBPQ13148 414 aaKnown RBP eCLIP3.58□□□□□ -1.843e-23■■■■■ 39.5
XRN1-209ENST00000472625 COBLL1Q53SF7 1204 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FAM133BQ5BKY9 247 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 MS4A13Q5J8X5 152 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PITRM1Q5JRX3 1037 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TMEM215Q68D42 235 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 IGFL4Q6B9Z1 124 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3GQ6DHY5 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3CQ6IPX1 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 KIAA1161Q6NSJ0 714 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FOXR2Q6PJQ5 311 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TMEM270Q6UE05 265 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 UBE2R2Q712K3 238 aaPredicted RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 PARGQ86W56 976 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 CHSY1Q86X52 802 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ZDHHC17Q8IUH5 632 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 MMAAQ8IVH4 418 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 DHX40Q8IX18 779 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3Q8IZP1 549 aaPredicted RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 ARL14Q8N4G2 192 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 CARNMT1Q8N4J0 409 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 AFAP1L2Q8N4X5 818 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ATP6V0D2Q8N8Y2 350 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 DCBLD1Q8N8Z6 715 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SLC4A11Q8NBS3 891 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 MSANTD4Q8NCY6 345 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 OR4C6Q8NH72 309 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 OR14C36Q8NHC7 312 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 KCNE4Q8WWG9 221 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SORCS1Q8WY21 1168 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 NAT6Q93015 286 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SNX21Q969T3 373 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FAM131CQ96AQ9 280 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FAM149B1Q96BN6 582 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 NT5C1BQ96P26 610 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SORCS2Q96PQ0 1159 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 GSDMAQ96QA5 445 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 C1QTNF7Q9BXJ2 289 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 MIS12Q9H081 205 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 POFUT1Q9H488 388 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PRORYQ9H606 182 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 MMRN2Q9H8L6 949 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FAM204AQ9H8W3 233 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 POPDC2Q9HBU9 364 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 APOBEC3GQ9HC16 384 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 EMC7Q9NPA0 242 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 CD93Q9NPY3 652 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 KLHL11Q9NVR0 708 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 NLGN3Q9NZ94 848 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 PCDHA7Q9UN72 937 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ZFR2Q9UPR6 939 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 BTBD3Q9Y2F9 522 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 COQ4Q9Y3A0 265 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 SLC30A1Q9Y6M5 507 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ANAPC1Q9H1A4 1944 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 FLNBO75369 2602 aaKnown RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 BSNQ9UPA5 3926 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.57□□□□□ -1.84
XRN1-209ENST00000472625 FAM237AA0A1B0GTK4 181 aa3.57□□□□□ -1.84
XRN1-209ENST00000472625 A0A1W2PR77 199 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms