RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SCARF2Q96GP6 870 aaPredicted RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 TEFMQ96QE5 360 aaKnown RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 PEBP4Q96S96 227 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 AGAP2Q99490 1192 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 VPS16Q9H269 839 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 ATP13A3Q9H7F0 1226 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 NLRC4Q9NPP4 1024 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 TRNAU1APQ9NX07 287 aaKnown RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 TAB2Q9NYJ8 693 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 ADAM22Q9P0K1 906 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 SLC17A4Q9Y2C5 497 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 MRPS18BQ9Y676 258 aaKnown RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 A8MU76 341 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 HTRA2O43464 458 aaPredicted RBP9.28□□□□□ -0.92
VCL-204ENST00000472585 HEXIM1O94992 359 aaKnown RBP9.28□□□□□ -0.92
VCL-204ENST00000472585 FURINP09958 794 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 RNF224P0DH78 156 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 KELP23276 732 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 SERPINA4P29622 427 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 POLR2FP61218 127 aaKnown RBP9.28□□□□□ -0.92
VCL-204ENST00000472585 MC2RQ01718 297 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 BCL2L1Q07817 233 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 ABHD18Q0P651 414 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 TCP11X2Q5H9J9 407 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 DENND2CQ68D51 928 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 TECPR1Q7Z6L1 1165 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 TRIM74Q86UV6 250 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 NUS1Q96E22 293 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 DTD2Q96FN9 168 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 MCEEQ96PE7 176 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 KCTD15Q96SI1 283 aaPredicted RBP9.28□□□□□ -0.92
VCL-204ENST00000472585 DPYSL5Q9BPU6 564 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 SELENOOQ9BVL4 669 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 GSDMCQ9BYG8 508 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 TRIT1Q9H3H1 467 aaKnown RBP9.28□□□□□ -0.92
VCL-204ENST00000472585 CATSPERBQ9H7T0 1116 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 TAS2R14Q9NYV8 317 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 KCNMB2Q9Y691 235 aa9.28□□□□□ -0.92
VCL-204ENST00000472585 SHANK1Q9Y566 2161 aa9.27□□□□□ -0.92
VCL-204ENST00000472585 TNRC6AQ8NDV7 1962 aaKnown RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 NPIPB15A6NHN6 443 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 PES1O00541 588 aaKnown RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 FGF10O15520 208 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 RFPL1O75677 317 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 DLGAP3O95886 979 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 PDGFAP04085 211 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 IVLP07476 585 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 ZNF28P17035 718 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 ERCC2P18074 760 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 TPI1P60174 286 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 ILF3Q12906 894 aaKnown RBP eCLIP9.27□□□□□ -0.93
VCL-204ENST00000472585 TRAF2Q12933 501 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 TPD52L1Q16890 204 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 CRTC2Q53ET0 693 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 PYCR3Q53H96 274 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 SNAP47Q5SQN1 464 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 CFAP58Q5T655 872 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 CEACAM20Q6UY09 585 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 TMEM135Q86UB9 458 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 SLC37A2Q8TED4 501 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 SCAMP4Q969E2 229 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 PSKH2Q96QS6 385 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 ZPBPQ9BS86 351 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 CNPY3Q9BT09 278 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 TRIM7Q9C029 511 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 ABCG8Q9H221 673 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 NOD2Q9HC29 1040 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 PHPT1Q9NRX4 125 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 FAM207AQ9NSI2 230 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 ETNK2Q9NVF9 386 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 CD84Q9UIB8 345 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 SIK3Q9Y2K2 1263 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 PRKAB1Q9Y478 270 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 TMEM184BQ9Y519 407 aaPredicted RBP9.27□□□□□ -0.93
VCL-204ENST00000472585 F8P00451 2351 aa9.27□□□□□ -0.93
VCL-204ENST00000472585 OTOGQ6ZRI0 2925 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 ARHGAP42A6NI28 874 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 DFFAO00273 331 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 PDE2AO00408 941 aaPredicted RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 EEF2KO00418 725 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 INPP4BO15327 924 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 CLDN1O95832 211 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 PDHA1P08559 390 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 CTPS1P17812 591 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 VIPR1P32241 457 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 ACTR1BP42025 376 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 FASLGP48023 281 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 ACTR1AP61163 376 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 POLR2LP62875 67 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 PTSQ03393 145 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 IL10RBQ08334 325 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 EIF2S3LQ2VIR3 472 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 DOK6Q6PKX4 331 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 TRIM72Q6ZMU5 477 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 RFX8Q6ZV50 586 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 MARK2Q7KZI7 788 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 MCOLN2Q8IZK6 566 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms