RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RELL1Q8IUW5 271 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 GPR26Q8NDV2 337 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 OR4L1Q8NH43 312 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 GSDMBQ8TAX9 411 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 CDKL2Q92772 493 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 SCAMP4Q969E2 229 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 ULK4Q96C45 1275 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 C9orf72Q96LT7 481 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 IL26Q9NPH9 171 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 TREX1Q9NSU2 369 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 C20orf96Q9NUD7 363 aaPredicted RBP16.78■□□□□ 0.28
CCM2-205ENST00000472223 SLC2A6Q9UGQ3 507 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 EIF2B4Q9UI10 523 aaKnown RBP16.78■□□□□ 0.28
CCM2-205ENST00000472223 CRLS1Q9UJA2 301 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 MYLKQ15746 1914 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 PRR5-ARHGAP8B1AHC4 643 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 MAGEC1O60732 1142 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 PMLP29590 882 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 ECHS1P30084 290 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 PMS2P54278 862 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 ACVR1Q04771 509 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 SRSF5Q13243 272 aaKnown RBP16.77■□□□□ 0.28
CCM2-205ENST00000472223 CRYMQ14894 314 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 WSCD2Q2TBF2 565 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 PLK5Q496M5 336 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 PMS2CLQ68D20 193 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 PNCKQ6P2M8 343 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 ARMCX6Q7L4S7 300 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 SNX20Q7Z614 316 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 LMNTD2Q8IXW0 634 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 OR13J1Q8NGT2 312 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 CENPTQ96BT3 561 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 ZC3H10Q96K80 434 aaKnown RBP16.77■□□□□ 0.28
CCM2-205ENST00000472223 ZNF778Q96MU6 729 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 MYOCQ99972 504 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 PHPT1Q9NRX4 125 aaPredicted RBP16.77■□□□□ 0.28
CCM2-205ENST00000472223 CATSPERZQ9NTU4 200 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 ARGLU1Q9NWB6 273 aaPredicted RBP16.77■□□□□ 0.28
CCM2-205ENST00000472223 SUSD2Q9UGT4 822 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 RAB21Q9UL25 225 aa16.77■□□□□ 0.28
CCM2-205ENST00000472223 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
CCM2-205ENST00000472223 CCDC162PA2VCL2 907 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 A6NNZ2 444 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 CACNB4O00305 520 aaPredicted RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 GOT2P00505 430 aaKnown RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 RALBP11234 206 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 KELP23276 732 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 PSMA3P25788 255 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 HTR1BP28222 390 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 TEAD1P28347 426 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 STX2P32856 288 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 THOP1P52888 689 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 FGL2Q14314 439 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 INPP5AQ14642 412 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 IRF4Q15306 451 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 TEAD4Q15561 434 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 CHRNA6Q15825 494 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 HENMT1Q5T8I9 393 aaKnown RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 CERS6Q6ZMG9 384 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 UNC5AQ6ZN44 842 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 CAPN12Q6ZSI9 719 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 RFLNAQ6ZTI6 216 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 PTAR1Q7Z6K3 402 aaPredicted RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 RABEPKQ7Z6M1 372 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 IGDCC3Q8IVU1 814 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 GSPT2Q8IYD1 628 aaKnown RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
CCM2-205ENST00000472223 HEXDCQ8WVB3 486 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 FAM167BQ9BTA0 163 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 KCNH6Q9H252 994 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 WDR26Q9H7D7 661 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 FZD3Q9NPG1 666 aa16.76■□□□□ 0.27
CCM2-205ENST00000472223 CFAP99D6REC4 459 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 F8W8V4 182 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 CCL22O00626 93 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 CD3EAPO15446 510 aaKnown RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 LILRB5O75023 590 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 SLC25A14O95258 325 aaPredicted RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 GM2AP17900 193 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 RABIFP47224 123 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 YPEL5P62699 121 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 RACK1P63244 317 aaKnown RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 NFATC2Q13469 925 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 PTK2BQ14289 1009 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 BRD3Q15059 726 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 KYNUQ16719 465 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 LDLRAP1Q5SW96 308 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 STEAP4Q687X5 459 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 NEPROQ6NW34 567 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 KCNMB4Q86W47 210 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 DCP2Q8IU60 420 aaKnown RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 PHYKPLQ8IUZ5 450 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 SLC41A1Q8IVJ1 513 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 AGGF1Q8N302 714 aaeCLIP16.75■□□□□ 0.27
CCM2-205ENST00000472223 DNASE2BQ8WZ79 361 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 CERS2Q96G23 380 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 KLHDC7BQ96G42 594 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 DCUN1D1Q96GG9 259 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms