RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PATE4P0C8F1 98 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 CTAGE8P0CG41 777 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 FAM106CPP0CH98 169 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 GNAQP50148 359 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 CAMK1Q14012 370 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 HIST2H2BDQ6DRA6 164 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 OR7E24Q6IFN5 339 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 ATF7IPQ6VMQ6 1270 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 ZNF704Q6ZNC4 412 aaPredicted RBP4.43□□□□□ -1.7
CD46-213ENST00000471987 PQLC2Q6ZP29 291 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 QSOX2Q6ZRP7 698 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 CPOQ8IVL8 374 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 CTAGE4Q8IX94 777 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 TM9SF4Q92544 642 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 KLHL15Q96M94 604 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 LBHD1Q9BQE6 289 aaPredicted RBP4.43□□□□□ -1.7
CD46-213ENST00000471987 MPP6Q9NZW5 540 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.43□□□□□ -1.7
CD46-213ENST00000471987 POLG2Q9UHN1 485 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 CEPT1Q9Y6K0 416 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 EGFP01133 1207 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 NR1D1P20393 614 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 DCTP40126 519 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 AMPHP49418 695 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 GRAMD1BQ3KR37 738 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 USP41Q3LFD5 358 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 LDHAL6AQ6ZMR3 332 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 HAPLN4Q86UW8 402 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 ANKRD18AQ8IVF6 992 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 SPEM1Q8N4L4 309 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 OR5R1Q8NH85 324 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 THAP6Q8TBB0 222 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 PABPC5Q96DU9 382 aaKnown RBP4.42□□□□□ -1.7
CD46-213ENST00000471987 LINGO1Q96FE5 620 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 STAMBPL1Q96FJ0 436 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 RPS6KC1Q96S38 1066 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 FUZQ9BT04 418 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 FSD1Q9BTV5 496 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 GLIS2Q9BZE0 524 aaPredicted RBP4.42□□□□□ -1.7
CD46-213ENST00000471987 GPR63Q9BZJ6 419 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 TFB2MQ9H5Q4 396 aaKnown RBP4.42□□□□□ -1.7
CD46-213ENST00000471987 ZNF624Q9P2J8 865 aaPredicted RBP4.42□□□□□ -1.7
CD46-213ENST00000471987 KCNK7Q9Y2U2 307 aa4.42□□□□□ -1.7
CD46-213ENST00000471987 AAR2Q9Y312 384 aaKnown RBP4.42□□□□□ -1.7
CD46-213ENST00000471987 USP17L23D6RBM5 183 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 TNPO2O14787 897 aaKnown RBP4.41□□□□□ -1.7
CD46-213ENST00000471987 PRKNO60260 465 aaPredicted RBP4.41□□□□□ -1.7
CD46-213ENST00000471987 ZNF500O60304 480 aaPredicted RBP4.41□□□□□ -1.7
CD46-213ENST00000471987 DRG2P55039 364 aaKnown RBP4.41□□□□□ -1.7
CD46-213ENST00000471987 TAS2R38P59533 333 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 RPL24P83731 157 aaKnown RBP4.41□□□□□ -1.7
CD46-213ENST00000471987 BIRC2Q13490 618 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 C6orf141Q5SZD1 244 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 ZNF280DQ6N043 979 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 CACNA2D4Q7Z3S7 1137 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 GPR180Q86V85 440 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 LRRTM4Q86VH4 590 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 BEST3Q8N1M1 668 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 STPG4Q8N801 248 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 SLC38A5Q8WUX1 472 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 GRAMD2BQ96HH9 432 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 EIF2AK1Q9BQI3 630 aaKnown RBP4.41□□□□□ -1.7
CD46-213ENST00000471987 GPR52Q9Y2T5 361 aa4.41□□□□□ -1.7
CD46-213ENST00000471987 ZCWPW2A0A1B0GU75 182 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 IFNL4K9M1U5 179 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 TSPAN4O14817 238 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 CAVIN2O95810 425 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 ZNF23P17027 643 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 CDAP32320 146 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 RPP30P78346 268 aaKnown RBP4.4□□□□□ -1.71
CD46-213ENST00000471987 DECR1Q16698 335 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 SLC9B1Q4ZJI4 515 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 ZNF497Q6ZNH5 498 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 HMGCLL1Q8TB92 370 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 TAAR8Q969N4 342 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 RHBDF1Q96CC6 855 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 KLHL29Q96CT2 875 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 MPHOSPH8Q99549 860 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 ARPC5LQ9BPX5 153 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 HERPUD2Q9BSE4 406 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 FBXL2Q9UKC9 423 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 KLHL20Q9Y2M5 609 aa4.4□□□□□ -1.71
CD46-213ENST00000471987 EIF3FO00303 357 aaPredicted RBP4.39□□□□□ -1.71
CD46-213ENST00000471987 VCYO14598 125 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 EXTL3O43909 919 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 CHRNB4P30926 498 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 AHRP35869 848 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 PLIN5Q00G26 463 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 GRIK2Q13002 908 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 MYLK3Q32MK0 819 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 WDR38Q5JTN6 314 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 DCST1Q5T197 706 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 SRBD1Q8N5C6 995 aaKnown RBP4.39□□□□□ -1.71
CD46-213ENST00000471987 ACVR1CQ8NER5 493 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 ZBTB10Q96DT7 871 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms