RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 CERCAMQ5T4B2 595 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 BZW1Q7L1Q6 419 aaKnown RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 RHOT1Q8IXI2 618 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 PLD5Q8N7P1 536 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 LRRN4CLQ8ND94 238 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 EXD1Q8NHP7 514 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 AP2M1Q96CW1 435 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 PRR11Q96HE9 360 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 LGMNQ99538 433 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 ADGRE3Q9BY15 652 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 DPH1Q9BZG8 443 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 STRADBQ9C0K7 418 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 ABCG8Q9H221 673 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 LRRN3Q9H3W5 708 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 PRORYQ9H606 182 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 PCDH9Q9HC56 1237 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 RABGEF1Q9UJ41 708 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 CHKBQ9Y259 395 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 TTLL3Q9Y4R7 772 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 COL27A1Q8IZC6 1860 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-211ENST00000471260 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 GOLGA6CA6NDK9 693 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 ANKRD66B4E2M5 251 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 D6RAR5 112 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 PPP1R12AO14974 1030 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-211ENST00000471260 KRT86O43790 486 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 JCHAINP01591 159 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 RPLP0P05388 317 aaKnown RBP13.44□□□□□ -0.26
HMGN1-211ENST00000471260 GOLGA6DP0CG33 693 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CCKBRP32239 447 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 STC1P52823 247 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 PDX1P52945 283 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 UCNP55089 124 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CCL7P80098 99 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 TLE3Q04726 772 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 NIPAL4Q0D2K0 466 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CLPPQ16740 277 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-211ENST00000471260 ZNF569Q5MCW4 686 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 BROXQ5VW32 411 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 C17orf82Q86X59 251 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-211ENST00000471260 SPACA3Q8IXA5 215 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CCL4L1Q8NHW4 92 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CCHCR1Q8TD31 782 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 TMEM159Q96B96 161 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 MLPHQ9BV36 600 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-211ENST00000471260 CDH19Q9H159 772 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 LZTFL1Q9NQ48 299 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 GOLGA6AQ9NYA3 693 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 LRIT1Q9P2V4 623 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 SUFUQ9UMX1 484 aa13.44□□□□□ -0.26
HMGN1-211ENST00000471260 ARHGEF17Q96PE2 2063 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-211ENST00000471260 A0A1W2PQM1 296 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CCDC66A2RUB6 948 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CTAGE15A4D2H0 777 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 B4DGG1 531 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 SOD1P00441 154 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 FUCA1P04066 466 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 ITGA2BP08514 1039 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CTAGE8P0CG41 777 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 GNPDA1P46926 289 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 NR2C2P49116 596 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 HADHBP55084 474 aaKnown RBP13.43□□□□□ -0.26
HMGN1-211ENST00000471260 INHBCP55103 352 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 SKOR1P84550 965 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 IHHQ14623 411 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 TCEA2Q15560 299 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 SLC14A2Q15849 920 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CLEC14AQ86T13 490 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CTAGE6Q86UF2 777 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 NRROSQ86YC3 692 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CCNJLQ8IV13 435 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 CTAGE4Q8IX94 777 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 SLC35F6Q8N357 371 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 LSM14AQ8ND56 463 aaKnown RBP13.43□□□□□ -0.26
HMGN1-211ENST00000471260 ZDHHC1Q8WTX9 485 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 OLFM3Q96PB7 478 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 UBL7Q96S82 380 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-211ENST00000471260 ACBD3Q9H3P7 528 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 SYNDIG1Q9H7V2 258 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 PKD2L2Q9NZM6 624 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 TAAR2Q9P1P5 351 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 HEY1Q9Y5J3 304 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 UNC13CQ8NB66 2214 aa13.43□□□□□ -0.26
HMGN1-211ENST00000471260 A0A1W2PNU3 283 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 KCNK1O00180 336 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 PLD2O14939 933 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 LCA5LO95447 670 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 CLDN7O95471 211 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 KRT1P04264 644 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 FGF1P05230 155 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 MMP2P08253 660 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 ADCY8P40145 1251 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 CD86P42081 329 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 GPR3P46089 330 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 CTBSQ01459 385 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms