RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C7P10643 843 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MAPKAPK2P49137 400 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 GPR15P49685 360 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 NAA20P61599 178 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 DSC1Q08554 894 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 POLD3Q15054 466 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 NFE2Q16621 373 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PFKFB4Q16877 469 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MAP7D1Q3KQU3 841 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 VPS26BQ4G0F5 336 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 ADGRG5Q8IZF4 528 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 OR4L1Q8NH43 312 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 FAM110BQ8TC76 370 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 LRRC58Q96CX6 371 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 RMND5BQ96G75 393 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MYRFLQ96LU7 910 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MUC13Q9H3R2 512 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 C8orf4Q9NR00 106 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 ABI2Q9NYB9 513 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PTBP2Q9UKA9 531 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 DHRS12A0PJE2 317 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 KLK8O60259 260 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 SLC4A1P02730 911 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 IDO1P14902 403 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 THPOP40225 353 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 ZFP36L2P47974 494 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CLCQ05315 142 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 LCP2Q13094 533 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 INPP5AQ14642 412 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 PTPRCAPQ14761 206 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 DDR2Q16832 855 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 SDHAF4Q5VUM1 108 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 RAP1GAP2Q684P5 730 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 SPATA19Q7Z5L4 167 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 SPRED1Q7Z699 444 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 PTRH1Q86Y79 214 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CAMK1DQ8IU85 385 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 DRAXINQ8NBI3 349 aaPredicted RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 OR13C4Q8NGS5 318 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CLK4Q9HAZ1 481 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 SYTL2Q9HCH5 934 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CATSPERZQ9NTU4 200 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 RSL24D1Q9UHA3 163 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CCDC160A6NGH7 325 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 ANGPT2O15123 496 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 AKAP10O43572 662 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 GJB3O75712 270 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CDK4P11802 303 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CYBAP13498 195 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 MYF6P23409 242 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 ACVRL1P37023 503 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 NME5P56597 212 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 EFEMP1Q12805 493 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 ATP6AP1Q15904 470 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 FXNQ16595 210 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 C5orf22Q49AR2 442 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 TBCELQ5QJ74 424 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 KRT80Q6KB66 452 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 ERI1Q8IV48 349 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 PAPD5Q8NDF8 572 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 STAG3L4Q8TBR4 150 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 GRIN3AQ8TCU5 1115 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 TMEM125Q96AQ2 219 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 PPWD1Q96BP3 646 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 ZNF599Q96NL3 588 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 NUSAP1Q9BXS6 441 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 TRIM54Q9BYV2 358 aa13.6□□□□□ -0.23
BRCA1-209ENST00000470026 OLA1Q9NTK5 396 aaKnown RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 NLE1Q9NVX2 485 aaPredicted RBP13.6□□□□□ -0.23
BRCA1-209ENST00000470026 A0A1B0GTL3 188 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 STX16O14662 325 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 ACOX3O15254 700 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 NDST3O95803 873 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 GPIP06744 558 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 HGFP14210 728 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 CCT8P50990 548 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 ZNF140P52738 457 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-209ENST00000470026 YBX1P67809 324 aaKnown RBP13.59□□□□□ -0.23
BRCA1-209ENST00000470026 RING1Q06587 406 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 RCAN2Q14206 197 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 XKR7Q5GH72 579 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 TRIML2Q8N7C3 387 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 BLOC1S5Q8TDH9 187 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 EXT2Q93063 718 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 TMIGD2Q96BF3 282 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 TUBGCP3Q96CW5 907 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 CENPNQ96H22 339 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms