RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 HOXC4P09017 264 aaPredicted RBP20.69■□□□□ 0.9
BRAF-202ENST00000469930 MC4RP32245 332 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 FOXN2P32314 431 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 STX2P32856 288 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 CACNG1Q06432 222 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 MGAT5Q09328 741 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 ILF2Q12905 390 aaKnown RBP20.69■□□□□ 0.9
BRAF-202ENST00000469930 LRRC14Q15048 493 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 ANGPT1Q15389 498 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 WSCD2Q2TBF2 565 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 BEND6Q5SZJ8 279 aaPredicted RBP20.69■□□□□ 0.9
BRAF-202ENST00000469930 GALNT7Q86SF2 657 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 ZNF398Q8TD17 642 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 BIRC7Q96CA5 298 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 TCF12Q99081 682 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 RIOK2Q9BVS4 552 aaKnown RBP20.69■□□□□ 0.9
BRAF-202ENST00000469930 COQ6Q9Y2Z9 468 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.69■□□□□ 0.9
BRAF-202ENST00000469930 SLC30A1Q9Y6M5 507 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 TRPM6Q9BX84 2022 aa20.69■□□□□ 0.9
BRAF-202ENST00000469930 A0A1W2PPC4 97 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 FAM159BA6NKW6 160 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 LILRB5O75023 590 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 PRAMEF1O95521 474 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 GOT2P00505 430 aaKnown RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 SLC4A1P02730 911 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 ITGALP20701 1170 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 OGNP20774 298 aaKnown RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 HNRNPA2B1P22626 353 aaKnown RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 TRIM23P36406 574 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 TMPRSS15P98073 1019 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 NFATC2Q13469 925 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 NAB1Q13506 487 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 CHRNA6Q15825 494 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 LYPLAL1Q5VWZ2 237 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 NEPROQ6NW34 567 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 PNCKQ6P2M8 343 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 ADAMTSL4Q6UY14 1074 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 CERS6Q6ZMG9 384 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 KIAA0408Q6ZU52 694 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 KCNMB4Q86W47 210 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 OR6P1Q8NGX9 317 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 DNASE2BQ8WZ79 361 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 SCAMP4Q969E2 229 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 ULK4Q96C45 1275 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 ZC3H10Q96K80 434 aaKnown RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 ORAI3Q9BRQ5 295 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 FAM167BQ9BTA0 163 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 ACSS3Q9H6R3 686 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 SUDS3Q9H7L9 328 aaPredicted RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 C20orf96Q9NUD7 363 aaPredicted RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 ARGLU1Q9NWB6 273 aaPredicted RBP20.68■□□□□ 0.9
BRAF-202ENST00000469930 FETUBQ9UGM5 382 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 PCDHGA2Q9Y5H1 932 aa20.68■□□□□ 0.9
BRAF-202ENST00000469930 A0A087WUV0 522 aaPredicted RBP20.67■□□□□ 0.9
BRAF-202ENST00000469930 UQCRHLA0A096LP55 91 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 CCDC78A2IDD5 438 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 PRAMEF26H0Y7S4 382 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 SOD1P00441 154 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 UQCRHP07919 91 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 CD27P26842 260 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 RPL6Q02878 288 aaKnown RBP20.67■□□□□ 0.9
BRAF-202ENST00000469930 NUMA1Q14980 2115 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 AARS2Q5JTZ9 985 aaKnown RBP20.67■□□□□ 0.9
BRAF-202ENST00000469930 MRNIPQ6NTE8 343 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 TRMT10BQ6PF06 316 aaKnown RBP20.67■□□□□ 0.9
BRAF-202ENST00000469930 CNPY4Q8N129 248 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 TMEM145Q8NBT3 493 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 PRRX2Q99811 253 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 SPATA16Q9BXB7 569 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 ASB8Q9H765 288 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 VPS37BQ9H9H4 285 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 CATSPERZQ9NTU4 200 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 NSMCE4AQ9NXX6 385 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 RABGEF1Q9UJ41 708 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 ZDBF2Q9HCK1 2354 aa20.67■□□□□ 0.9
BRAF-202ENST00000469930 PRR23AA6NEV1 266 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 CCL22O00626 93 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 CD3EAPO15446 510 aaKnown RBP20.66■□□□□ 0.9
BRAF-202ENST00000469930 MAP3K13O43283 966 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 BCKDHBP21953 392 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 AKT2P31751 481 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 HSD17B3P37058 310 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 PPARGP37231 505 aaPredicted RBP20.66■□□□□ 0.9
BRAF-202ENST00000469930 THOC5Q13769 683 aaKnown RBP20.66■□□□□ 0.9
BRAF-202ENST00000469930 SLC29A2Q14542 456 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 UAP1Q16222 522 aaPredicted RBP20.66■□□□□ 0.9
BRAF-202ENST00000469930 TYSND1Q2T9J0 566 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 ATP13A5Q4VNC0 1218 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 FASTKD1Q53R41 847 aaKnown RBP20.66■□□□□ 0.9
BRAF-202ENST00000469930 TEDDM1Q5T9Z0 273 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 FAM151BQ6UXP7 276 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 LPCAT2Q7L5N7 544 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 SDCCAG8Q86SQ7 713 aaPredicted RBP20.66■□□□□ 0.9
BRAF-202ENST00000469930 FBF1Q8TES7 1133 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 HEXDCQ8WVB3 486 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 BTN2A2Q8WVV5 523 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 CDKL2Q92772 493 aa20.66■□□□□ 0.9
BRAF-202ENST00000469930 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.66■□□□□ 0.9
BRAF-202ENST00000469930 CYTH2Q99418 400 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms