RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 IGHV1OR21-1A0A087WYE8 117 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 J3QKU1 62 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 EML2O95834 649 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 JCHAINP01591 159 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
CPSF4-210ENST00000469897 HLA-DQB2P05538 268 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 FGF3P11487 239 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-210ENST00000469897 ZNF30P17039 623 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 STC1P52823 247 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 LIMK2P53671 638 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 PEX6Q13608 980 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 ZNF765Q7L2R6 523 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 ZNF761Q86XN6 746 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-210ENST00000469897 DTX1Q86Y01 620 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 MAP7D3Q8IWC1 876 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 NRSN1Q8IZ57 195 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 EXTL1Q92935 676 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 SGF29Q96ES7 293 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 CCDC74BQ96LY2 380 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 WDR24Q96S15 920 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 ZNF670Q9BS34 389 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
CPSF4-210ENST00000469897 CDH19Q9H159 772 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 PCDH9Q9HC56 1237 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 KCNK4Q9NYG8 393 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
CPSF4-210ENST00000469897 CNOT6Q9ULM6 557 aaKnown RBP13.2□□□□□ -0.3
CPSF4-210ENST00000469897 PCYT1BQ9Y5K3 369 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-210ENST00000469897 COL27A1Q8IZC6 1860 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-210ENST00000469897 PYCARD-AS1I3L0S3 204 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 KCNK1O00180 336 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 KRT7P08729 469 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 WT1P19544 449 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-210ENST00000469897 KDELR1P24390 212 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 CYP4F2P78329 520 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-210ENST00000469897 ALG1LQ6GMV1 187 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 CHST15Q7LFX5 561 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-210ENST00000469897 KDELC2Q7Z4H8 507 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 GALNT13Q8IUC8 556 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 CCDC13Q8IYE1 715 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 RAPGEF5Q92565 580 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 FATE1Q969F0 183 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 PMEPA1Q969W9 287 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 COX14Q96I36 57 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 TAAR9Q96RI9 348 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 ARHGAP9Q9BRR9 750 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 FAM83DQ9H4H8 585 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 NENFQ9UMX5 172 aa13.19□□□□□ -0.3
CPSF4-210ENST00000469897 OAS3Q9Y6K5 1087 aaKnown RBP13.19□□□□□ -0.3
CPSF4-210ENST00000469897 GCN1Q92616 2671 aaKnown RBP13.18□□□□□ -0.3
CPSF4-210ENST00000469897 A8MU76 341 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 ANKRD66B4E2M5 251 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 HGSO14964 777 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-210ENST00000469897 DNAJC6O75061 913 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 PYGLP06737 847 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 MMP2P08253 660 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 MX2P20592 715 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 CD86P42081 329 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 PPM1FP49593 454 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-210ENST00000469897 ARSDP51689 593 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 MESDQ14696 234 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 QPCTQ16769 361 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 TMEM71Q6P5X7 295 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 CNTD1Q8N815 330 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 ZSCAN1Q8NBB4 408 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 SLC37A2Q8TED4 501 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 CTNNBL1Q8WYA6 563 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-210ENST00000469897 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 RNF157Q96PX1 679 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 SLC38A3Q99624 504 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 MLPHQ9BV36 600 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-210ENST00000469897 HAUS2Q9NVX0 235 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 OCIAD1Q9NX40 245 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 DTLQ9NZJ0 730 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
CPSF4-210ENST00000469897 C1orf232A0A0U1RR37 186 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 FADS2P1A8MWK0 482 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 KALRNO60229 2985 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 SNX2O60749 519 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 CA4P22748 312 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 CD82P27701 267 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 HNRNPH3P31942 346 aaKnown RBP13.17□□□□□ -0.3
CPSF4-210ENST00000469897 CSTF2P33240 577 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPSF4-210ENST00000469897 SPINT3P49223 89 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 RPL26P61254 145 aaKnown RBP13.17□□□□□ -0.3
CPSF4-210ENST00000469897 NFATC3Q12968 1075 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 NFATC2Q13469 925 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPSF4-210ENST00000469897 LRP8Q14114 963 aa13.17□□□□□ -0.3
CPSF4-210ENST00000469897 SLC18A3Q16572 532 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms