RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 OAS3Q9Y6K5 1087 aaKnown RBP5.29□□□□□ -1.56
PTPN4-209ENST00000469511 RPS6KL1Q9Y6S9 549 aa5.29□□□□□ -1.56
PTPN4-209ENST00000469511 SEC16AO15027 2179 aa5.29□□□□□ -1.56
PTPN4-209ENST00000469511 AKAP9Q99996 3911 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 IGLV3-10A0A075B6K4 115 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ILVBLA1L0T0 632 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 TRIM49BA6NDI0 452 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 RHPN2P1A8MT19 583 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 A8MX80 341 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 B4E171 279 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 MKRN2OSH3BPM6 223 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 BUB1BO60566 1050 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 KATNA1O75449 491 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 LETM1O95202 739 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ERBB2P04626 1255 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 CTSBP07858 339 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ATF4P18848 351 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 MAP4P27816 1152 aaKnown RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 CSTF2P33240 577 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 DLSTP36957 453 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 TSPAN7P41732 249 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 STAT5AP42229 794 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 POLD2P49005 469 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 CXCR3P49682 368 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 RPS18P62269 152 aaKnown RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 MC2RQ01718 297 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 APBA1Q02410 837 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 GNA12Q03113 381 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ENPEPQ07075 957 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ABHD18Q0P651 414 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 RALGDSQ12967 914 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 PDCLQ13371 301 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 SEPT6Q14141 434 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 MPP2Q14168 576 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 NR1D2Q14995 579 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 PTPRRQ15256 657 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 TMEM71Q6P5X7 295 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 GDPD4Q6W3E5 623 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ARHGAP22Q7Z5H3 698 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 SETD3Q86TU7 594 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 PASD1Q8IV76 773 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 OR2AP1Q8NGE2 309 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 OR4D9Q8NGE8 314 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 OR56A4Q8NGH8 313 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ZNF606Q8WXB4 792 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 ARHGEF2Q92974 986 aaKnown RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 EXOC2Q96KP1 924 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 PPP1R9BQ96SB3 815 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 NPY6RQ99463 290 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 MAGEF1Q9HAY2 307 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 PCDH12Q9NPG4 1184 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 TAAR2Q9P1P5 351 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 CROTQ9UKG9 612 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 TMEM184BQ9Y519 407 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-209ENST00000469511 DGKBQ9Y6T7 804 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
PTPN4-209ENST00000469511 A0A0U1RQS6 177 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 PRSS38A1L453 326 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 MEGF11A6BM72 1044 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 TMEM110-MUSTN1A8MSY1 372 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 BECN2A8MW95 431 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FAM72CH0Y354 149 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 DDX3YO15523 660 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 TEX33O43247 280 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RFPL1O75677 317 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 CBX6O95503 412 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 YEATS4O95619 227 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 POP4O95707 220 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 SLC2A3P11169 496 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 CCNB1P14635 433 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RPL13P26373 211 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 HTR1BP28222 390 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 ACADSBP45954 432 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RGRP47804 291 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FMO5P49326 533 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 SULT1E1P49888 294 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 CCL11P51671 97 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 PMS2P54278 862 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RNASE9P60153 205 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 YWHAEP62258 255 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 SEMA5AQ13591 1074 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 C2CD6Q53TS8 623 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FAM72AQ5TYM5 149 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FAM69BQ5VUD6 431 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 SP5Q6BEB4 398 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FAM72DQ6L9T8 149 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RETSATQ6NUM9 610 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 GJB7Q6PEY0 223 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 SLC30A9Q6PML9 568 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 OLFML1Q6UWY5 402 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FAM72BQ86X60 149 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 CEP57L1Q8IYX8 460 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 GUF1Q8N442 669 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 BEND7Q8N7W2 519 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 RBMXL3Q8N7X1 1067 aaKnown RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 FNIP1Q8TF40 1166 aa5.27□□□□□ -1.57
PTPN4-209ENST00000469511 KIAA1143Q96AT1 154 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-209ENST00000469511 ISG20Q96AZ6 181 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms