RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ZNF30P17039 623 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 HNRNPH3P31942 346 aaKnown RBP24.35■■□□□ 1.49
PTCH1-210ENST00000468211 ACTR1BP42025 376 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 EPHB1P54762 984 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 ACTR1AP61163 376 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 PDK2Q15119 407 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 PYCR3Q53H96 274 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 NKAIN2Q5VXU1 208 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 TIGD7Q6NT04 549 aaPredicted RBP24.35■■□□□ 1.49
PTCH1-210ENST00000468211 ZNF765Q7L2R6 523 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 NDUFAF2Q8N183 169 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 RAPGEF5Q92565 580 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 TMEM159Q96B96 161 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 COX14Q96I36 57 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 WDR24Q96S15 920 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 XPO4Q9C0E2 1151 aaKnown RBP24.35■■□□□ 1.49
PTCH1-210ENST00000468211 IGHV5-10-1A0A0J9YXX1 117 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 EML2O95834 649 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 LIPCP11150 499 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 ASTE1Q2TB18 679 aaPredicted RBP24.34■■□□□ 1.49
PTCH1-210ENST00000468211 NLRP8Q86W28 1048 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 LPCAT1Q8NF37 534 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 CDH19Q9H159 772 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 PCDH9Q9HC56 1237 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 DTLQ9NZJ0 730 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 UVRAGQ9P2Y5 699 aa24.34■■□□□ 1.49
PTCH1-210ENST00000468211 CNOT6Q9ULM6 557 aaKnown RBP24.34■■□□□ 1.49
PTCH1-210ENST00000468211 MMP2P08253 660 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 H2AFZP0C0S5 128 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 CES1P23141 567 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 H2AFVQ71UI9 128 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 VASH2Q86V25 355 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 PMEPA1Q969W9 287 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 CCDC74BQ96LY2 380 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 AMACRQ9UHK6 382 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 PRKAB1Q9Y478 270 aa24.33■■□□□ 1.49
PTCH1-210ENST00000468211 OAS3Q9Y6K5 1087 aaKnown RBP24.33■■□□□ 1.49
PTCH1-210ENST00000468211 TRBV23OR9-2A0A075B6M9 112 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 ATP1A1P05023 1023 aaKnown RBP24.32■■□□□ 1.48
PTCH1-210ENST00000468211 KDELR1P24390 212 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 CSF2RBP32927 897 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 GPR3P46089 330 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 SLC18A3Q16572 532 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 ZNF761Q86XN6 746 aaPredicted RBP24.32■■□□□ 1.48
PTCH1-210ENST00000468211 MAP7D3Q8IWC1 876 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 CCDC13Q8IYE1 715 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 NRSN1Q8IZ57 195 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 CNTD1Q8N815 330 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 CCNYQ8ND76 341 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 EXD1Q8NHP7 514 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 CTNNBL1Q8WYA6 563 aaPredicted RBP24.32■■□□□ 1.48
PTCH1-210ENST00000468211 HDAC11Q96DB2 347 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 RNF157Q96PX1 679 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 TMEM9Q9P0T7 183 aa24.32■■□□□ 1.48
PTCH1-210ENST00000468211 SETXQ7Z333 2677 aaKnown RBP24.31■■□□□ 1.48
PTCH1-210ENST00000468211 IGHV1OR21-1A0A087WYE8 117 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 FADS2P1A8MWK0 482 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 KCNK1O00180 336 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 DNAJC6O75061 913 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 JCHAINP01591 159 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 KRT7P08729 469 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 WT1P19544 449 aaPredicted RBP24.31■■□□□ 1.48
PTCH1-210ENST00000468211 MPSTP25325 297 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 CD86P42081 329 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 ARSDP51689 593 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 ZBTB17Q13105 803 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 BIRC2Q13490 618 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 QPCTQ16769 361 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 DTX1Q86Y01 620 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 LYSMD1Q96S90 227 aa24.31■■□□□ 1.48
PTCH1-210ENST00000468211 ASMTLO95671 621 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 FGF3P11487 239 aaPredicted RBP24.3■■□□□ 1.48
PTCH1-210ENST00000468211 MAN1A1P33908 653 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 LIMK2P53671 638 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 RPL26P61254 145 aaKnown RBP24.3■■□□□ 1.48
PTCH1-210ENST00000468211 MESDQ14696 234 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 GALNT13Q8IUC8 556 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 PLD5Q8N7P1 536 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 SLC37A2Q8TED4 501 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 MED8Q96G25 268 aa24.3■■□□□ 1.48
PTCH1-210ENST00000468211 RPL26L1Q9UNX3 145 aaKnown RBP24.3■■□□□ 1.48
PTCH1-210ENST00000468211 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTCH1-210ENST00000468211 C1orf232A0A0U1RR37 186 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 PYGLP06737 847 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 MX2P20592 715 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 SPINT3P49223 89 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 CLPPQ16740 277 aaPredicted RBP24.29■■□□□ 1.48
PTCH1-210ENST00000468211 LINC00303Q3SY05 128 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 ZFYVE27Q5T4F4 411 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 HENMT1Q5T8I9 393 aaKnown RBP24.29■■□□□ 1.48
PTCH1-210ENST00000468211 EXD3Q8N9H8 876 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 EID2BQ96D98 161 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 DNAJC7Q99615 494 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 CEP41Q9BYV8 373 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 KCNK4Q9NYG8 393 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 ZNHIT2Q9UHR6 403 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 DNPEPQ9ULA0 475 aa24.29■■□□□ 1.48
PTCH1-210ENST00000468211 BOD1L1Q8NFC6 3051 aa24.28■■□□□ 1.48
PTCH1-210ENST00000468211 C3orf70A6NLC5 250 aaPredicted RBP24.28■■□□□ 1.48
PTCH1-210ENST00000468211 ANKRD66B4E2M5 251 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms